Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01299 ATGCTTCCACCTCTCCTCTCTTCTCTCTTCATCCTTTCCCTCCTCCACCTTGTCGTCGCCCATGAACAACATCGGTGGAAGCGGTGTGACAGCACCACCACCTACACAGCTAATTCAAACTTCTCGGCCAACCTTGGCCGAACACTCGACACTCTTAGGAATTTCACTTCCCTCACCAACTTCAACGCCACCACCACCGAATATGTCACAGCTCTCGCTCTCTGCCGAGGCGACTTAAACCCATCAGAATGCCAAACCTGCATCGACATTGCTGTCCCAGGCATTCGCCACCACTGCCCCATCCAAACTACTGCCGAGATATGGTACAATTTGTGTATGCTCAGATACTCCAGTGTCAACTTCCTAACCAGGCCTGATTACACGGTCTCGTTCATGTTAGATGACACTCGTAACGTTCCGCAACCAGATATTTACGACCACAGGGTACAAGTTATGACGCAGAACCTATCGATATCTGCAGGCCAGTTCGAGAAGCGATACGCTATAGGGTGGACGAGAGTAACCGGTACGCTAACACTTTATGGGTACGCTGAGTGTAGCCGAGACCTCAGTGGTGAGGATTGCACTCAATGCTTGTTGATTGCAAAGACCCAGATCGAGAGGTGTTGTTTGGGGAGATGGGGGGGTTGGATTGGTACCCCAAGTTGCTATATCCGGTTCAATATGGATCCGGTGTATAATAAAACTATTGCTGCACCAGAAATTTTGACCGATTTACCACCACCGCCGCTGCCGCTGTTGCCACCACCAATTACAAATGGTGGCAGTACTGGGAGAGGGATTGGGATGGTAGTTATTGGAGTTTCGGTCGCAGCAGTTGGGGCAGTTATTTTGGCAGTTGGGTGCTTGTGGATATTGATGAAGGGAAAGAAGATGAAGAGAATAATGAGAGAAAATAGTAGGATTGAAGTTGAAGAGATGATGATGAGGGATGGAGTAGGAATGAGATCTTTCTTTTATGACATGAGAACATTGGTGGCTGCAACTGACAACTTCTCTTCTATAAATCGGCTTGGAAGTGGTGGCTTTGGCACTGTTTATAAGGGGAGAATGACCAATGGTGAAGAAATAGCAGTGAAGAAACTCACAGTTGGGTCGATGCAAGGAGTAGAAGAATTCTCTAATGAAGTGAGATTGTTACTAAAAATACAGCACAGAAATTTTGTCAAAATGCTCGGATGTTGTGTTCAAGGAGAACATAAGATGTTAGTGTATGAGTACCTATCTAACAAGAGTCTCGACTACTTCCTCTTTGATAAGAGTAAGAGTGCAATACTTGATTGGCCTAGGCGCTTTAACATTATGATGGGCGTAGCGAGGGGGCTTCTGTATCTTCATGAAGATTCTCAACTACGGATCATCCATAGAGACATCAAAGCTAGCAACATCTTACTAGATGAAAACATGAACCCTAAGATATCAGACTTTGGCTTGGCAAAGCTCTTTCCCGATGAACATAGTCATCTCAGAACACGTCGAATTGCTGGAACTATTGGCTACATGGCACCGGAATATGCGGTTCAAGGCCTCATGTCGGCCAAGAGTGATGTCTTTAGCTTTGGGGTACTAATGTTAGAAATTATAAGTGGGAGAAAGAGCTATGATTTACAATTAGATGAACAAAGCCAAGAGCTCTTGAAATATACTTGGAGGTTAGAACAACAACAAAGGCACATGGAATTGGTAGATGTAACTATTGGTTCTTCTCCTCAAGCTAATGTATTGAAATGCATACGAATTGGATTATTGTGTTGTCAAAAAAGTATACAAGAGAGGCCAGTTATGTCATCTGTAGTGGTTATGCTCTCAAATGACTCAATTACAGTACCTCTTCCAGGAATGCCAGGCTATCAAAGTAGTAGATATAACTCAATTCAATTTTCCACAAGTAACAATGATCATGTGATTCATGAAAATGAAAATGTAAATGTCTCTAACAATTCTATTACAAATTCAATAGTGAGTGCTAGGTGA 1995 0.4366 MLPPLLSSLFILSLLHLVVAHEQHRWKRCDSTTTYTANSNFSANLGRTLDTLRNFTSLTNFNATTTEYVTALALCRGDLNPSECQTCIDIAVPGIRHHCPIQTTAEIWYNLCMLRYSSVNFLTRPDYTVSFMLDDTRNVPQPDIYDHRVQVMTQNLSISAGQFEKRYAIGWTRVTGTLTLYGYAECSRDLSGEDCTQCLLIAKTQIERCCLGRWGGWIGTPSCYIRFNMDPVYNKTIAAPEILTDLPPPPLPLLPPPITNGGSTGRGIGMVVIGVSVAAVGAVILAVGCLWILMKGKKMKRIMRENSRIEVEEMMMRDGVGMRSFFYDMRTLVAATDNFSSINRLGSGGFGTVYKGRMTNGEEIAVKKLTVGSMQGVEEFSNEVRLLLKIQHRNFVKMLGCCVQGEHKMLVYEYLSNKSLDYFLFDKSKSAILDWPRRFNIMMGVARGLLYLHEDSQLRIIHRDIKASNILLDENMNPKISDFGLAKLFPDEHSHLRTRRIAGTIGYMAPEYAVQGLMSAKSDVFSFGVLMLEIISGRKSYDLQLDEQSQELLKYTWRLEQQQRHMELVDVTIGSSPQANVLKCIRIGLLCCQKSIQERPVMSSVVVMLSNDSITVPLPGMPGYQSSRYNSIQFSTSNNDHVIHENENVNVSNNSITNSIVSAR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01299 664 SMART serkin_6 339 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01299 664 Pfam Salt stress response/antifungal 29 117 IPR002902 -
Eupl11g01299 664 Pfam Salt stress response/antifungal 140 228 IPR002902 -
Eupl11g01299 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 659 - -
Eupl11g01299 664 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Eupl11g01299 664 SUPERFAMILY Protein kinase-like (PK-like) 327 644 IPR011009 -
Eupl11g01299 664 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01299 664 Pfam Protein tyrosine and serine/threonine kinase 342 567 IPR001245 GO:0004672|GO:0006468
Eupl11g01299 664 CDD STKc_IRAK 345 609 - -
Eupl11g01299 664 ProSiteProfiles Gnk2-homologous domain profile. 127 232 IPR002902 -
Eupl11g01299 664 Gene3D Phosphorylase Kinase; domain 1 297 414 - -
Eupl11g01299 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Eupl11g01299 664 ProSiteProfiles Gnk2-homologous domain profile. 23 121 IPR002902 -
Eupl11g01299 664 FunFam Os08g0179000 protein 310 414 - -
Eupl11g01299 664 FunFam Cysteine-rich receptor-like protein kinase 41 415 615 - -
Eupl11g01299 664 Gene3D - 127 231 IPR038408 -
Eupl11g01299 664 Gene3D - 23 121 IPR038408 -
Eupl11g01299 664 Gene3D Transferase(Phosphotransferase) domain 1 415 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01299 Eupl-Chr11 19045336 19053404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01299 6 624 Receptor kinase-like Gene Family AT4G05200 38.170 5.04e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl11g01299 PK_Tyr_Ser-Thr 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01299 - - nnu:104603105 764.607