Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01296 ATGGGGTTTCTCTCTGGTTTGTGTGCGTGTTTGGAGAAGATAAAGAAAGGTAAAGGCGTCGAAGGTGGAGAAGACGAAGACGAGGGAAGTTCGTGGGATATATTATTCGAGTTTCAAACTCTGCAAATCGCTACCAATTATTTCTCCGAGTCGAATCAACTCGGTCACGGAGGCTTCGGCCCCGTTTACAAGGGGCTGCTGCCTAATGGTCAAGAAATAGCTGTGAAGAAGCTATCCATGTATTCGAGACAGGGATTGAGAGAATTCATAAATGAGGTAAAACTATTACTGAAAATTCAGCACAAGAACTTGGTCATATTGTTAGGATGTTGCGCGGAAGGAGCCGAGAAGATGCTCATTTACGAGTATCTGCCGAACAAGAGCCTCGACAAATTCCTCTTTGGTATCGAATTCTTCTCACTTTTTTTACATAATTCATTTATTTGGATTGAAAAAAAGACTGGGTGGCTGATACAATGCAATTGTTCAGATAAGAACAATTCCGCCTCCTTAGATTGGTCGAAACGTTTCAAGATAATTACGGGCGTGGCGAGAGGTCTTCTCTACCTACACGAAGAGGCCCCAGAACGGATTATTCATAGAGACATCAAAGCTAGTAACATATTGCTTGATCAGGGGTTGAACCCAAAGATTTCAGACTTTGGCCTGGCAAGGCTCTTTCCCGGGGATGATACCCATGTTAATACATTTAGGATTTCTGGTACTCATGGCTATATGGCTCCTGAGTATGCGATGCATGGATACTTGTCTGTGAAAACTGATGTCTTCAGCTTTGGGGTATTGGTGTTAGAGATTGTGAGCGGGAGAAAGAATCATGATCGGCAGCTCGACAAAGAAAAGATAGACCTCTTGAGCTATACATGGAAGCTCTTTCAACAAGGGAGGGCATTGGAGCTAGTGGATCCAACTCTTGCAAAATTGAATCTCGATGAGGCGGCTATGTGCATTCAGCTAGGGTTGTTGTGTTGTCAAGCAAGCGTCGTAGAGAGACCTGACATGAATACTGTTCATCTCAAGCTCGTGAGTGACTCGTTTACCTTGCCCAACCCTGGAAAACCAGGAATTCAAGGCCGCGGAGGGCGTTGGAGTACCACTTCTTCTGCTTTAACTAATACAAGTGCTAGTAGTTCTTCCTCTGCTGTAGCTTCTACAAGTGGTAGTTTAAATTTTTCTCAAAACTCAATATCTTTGTCCATCGTCGACGAGGGAAGATGA 1236 0.4393 MGFLSGLCACLEKIKKGKGVEGGEDEDEGSSWDILFEFQTLQIATNYFSESNQLGHGGFGPVYKGLLPNGQEIAVKKLSMYSRQGLREFINEVKLLLKIQHKNLVILLGCCAEGAEKMLIYEYLPNKSLDKFLFGIEFFSLFLHNSFIWIEKKTGWLIQCNCSDKNNSASLDWSKRFKIITGVARGLLYLHEEAPERIIHRDIKASNILLDQGLNPKISDFGLARLFPGDDTHVNTFRISGTHGYMAPEYAMHGYLSVKTDVFSFGVLVLEIVSGRKNHDRQLDKEKIDLLSYTWKLFQQGRALELVDPTLAKLNLDEAAMCIQLGLLCCQASVVERPDMNTVHLKLVSDSFTLPNPGKPGIQGRGGRWSTTSSALTNTSASSSSSAVASTSGSLNFSQNSISLSIVDEGR* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01296 411 Gene3D Phosphorylase Kinase; domain 1 23 123 - -
Eupl11g01296 411 ProSiteProfiles Protein kinase domain profile. 48 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01296 411 Pfam Protein tyrosine and serine/threonine kinase 51 293 IPR001245 GO:0004672|GO:0006468
Eupl11g01296 411 FunFam Cysteine-rich receptor-like protein kinase 41 157 353 - -
Eupl11g01296 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Eupl11g01296 411 FunFam Cysteine-rich receptor-like protein kinase 2 15 123 - -
Eupl11g01296 411 SUPERFAMILY Protein kinase-like (PK-like) 31 345 IPR011009 -
Eupl11g01296 411 Gene3D Transferase(Phosphotransferase) domain 1 156 353 - -
Eupl11g01296 411 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 401 - -
Eupl11g01296 411 CDD STKc_IRAK 54 343 - -
Eupl11g01296 411 SMART serkin_6 48 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01296 Eupl-Chr11 18985193 18990370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01296 4 362 Receptor kinase-like Gene Family AT4G21400 49.057 2.28e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl11g01296 PK_Tyr_Ser-Thr 6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01296 - - cave:132183608 554.673