Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01284 ATGGCAGAAATCCATTACCAAACCAAACCAACTAACAACACCCACAACGTACGTTTAAAGTTATTCGGATTTAACGTTTCAGAAGATGACGAGGTAGATTCCGGCAAAACTCGATCTGAGTCACCGGAATCAGCAGGTTTTCCGGCTACAGATGGCCGGAAATACGAGTGTCAGTATTGTTGTCGTGAATTTGCTAACTCACAAGCACTAGGTGGCCACCAAAACGCTCACAAGAAAGAGAGACAACAGCTAAAGCGTGCACAAATGCAAGCAAGTCGAAGTTCAGCCGCTTCTTATGTACGAAATCCGATGATATCAGCTTTTGCGCCACCACCCCACCTCCTCGCTCAGGGGTCTCCGGTGGTGGTTCCGGCCCCGGGGCAGCAATCGCCTTCGTGGGTTTACGTGTCTCGTGCAGCACCGCCGTTTCATGTGTCGCATGGGTGTATGTTTCCTCCTGGGGCGGGGAGAGCGGCGGCGCCACTAACATACGCCGGGAGTGTAGGGGAGGTAAGGACGATGATGGGGTCGTCTCAGGTTCGAGCTCATGCAGGGGTTATGCCTTCGTTGAGTAGGTTCTCTGGAGGGGATGGTGGACCTAGTGTTGATGATGCGATTGGCTTGGATTTGCATTTGAGCCTTGCGCCTTCTGCGCCCTGA 660 0.5273 MAEIHYQTKPTNNTHNVRLKLFGFNVSEDDEVDSGKTRSESPESAGFPATDGRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQASRSSAASYVRNPMISAFAPPPHLLAQGSPVVVPAPGQQSPSWVYVSRAAPPFHVSHGCMFPPGAGRAAAPLTYAGSVGEVRTMMGSSQVRAHAGVMPSLSRFSGGDGGPSVDDAIGLDLHLSLAPSAP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01284 219 SUPERFAMILY beta-beta-alpha zinc fingers 51 82 IPR036236 -
Eupl11g01284 219 PANTHER ZINC FINGER PROTEIN 5 5 218 IPR044299 GO:0010090
Eupl11g01284 219 MobiDBLite consensus disorder prediction 29 49 - -
Eupl11g01284 219 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Eupl11g01284 219 Gene3D Classic Zinc Finger 45 105 - -
Eupl11g01284 219 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Eupl11g01284 219 FunFam Zinc finger protein 6 44 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01284 Eupl-Chr11 18807589 18808480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01284 1 217 C2H2 Transcription Factor Family AT1G68360 46.275 1.98e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01284 - - nnu:104602911 326.635