Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01283 ATGGGTTCGAAGAGTGAAGGTCCTTCGAGTCCTGCTAGTCGTCGAGATCCTTACGAGGTGTTGAGCGTGTCGAGGGACTCGTCGGATCAGGAGATTAAGACGGCATACAGAAAGCTTGCTCTTAAGTATCACCCTGACAAAAATGTCAGCAATCCTGAAGCTTCAGAACTTTTCAAAGAGGTTGCATATTCTTATAGCATATTATCTGATCCAGAGAAAAGGAGGCAATATGACACTGCAGGATTTGAGGCTCTAGAAAGTGACGGCATGGATATGGAGATTGACTTGTCCAACCTGGGAACTGTCAATACTATGTTTGCAGCATTATTCAGCAAGCTTGGTGTCCCTATCAAGACGACAATTTCTGCTACTGTTCTTGAAGACGCTTTGAACGGAACTGTCACAGTTAGACCTCTGCCTATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCCCACTTTTTTGGTGTCACTATAAATGAGCAACAAGCCCAGGCAGGGATTGTAGTCAGAGTTACTTCAGCTGCACAAAGCAAATTTAAGCTACTTTATTTTGAACAAGATGCCAATGGAGGTTATGGGTTGGCTTTACAGGAAGATAGTGAGAAGACTGGCAAGGTAACATCTGCGGGGATGTATTTCTTACATTTTCAAGTGTACCGTCTGGATTCCACTGTGAATGCGTTAGCAATGGCTAAGGACCCTGAAGCGGCTTTTTTCAAAAGGTTGGAAGGTCTCCAACCATGTGAAGTCTCAGAAATAAAAGCTGGCACTCACATATTTGCTGTTTATGGAGACAATTTTTTTAAGACCGCTACCTATACCATTGAGGCTCTTTGTGCAAAGTCATTTGAGGATACCACGGTGAAGCTCAAAGAGATTGAGGCTCAAATTTTAAGGAAGAGAAATGAGCTTCGCCAGTTTGAGACAGACTACAGAAAGGCATTGGCACGCTTTCAAGAAGTCACCAACAGATACAGTCAAGAAAAACAATCTGTCGATGAGTTGCTGAAACAAAGAGAGAATATTCATTCTTCATTCACCATAGCCAGGCCAGTTAGTAACGCCAATGGGAGCAGTAGTGGTAGCGGCAAAGGTCCTAGTGAAGAGTTCAAGGCTGAGAGCCAGGGAGAGGATGATGGGAAGGATAAATCAACCAAGAAGAAATGGTTTAATCTGAATATGAAAGGATCTGATAAAAAGCTTGGTTGA 1218 0.431 MGSKSEGPSSPASRRDPYEVLSVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEASELFKEVAYSYSILSDPEKRRQYDTAGFEALESDGMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISATVLEDALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAQAGIVVRVTSAAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRLDSTVNALAMAKDPEAAFFKRLEGLQPCEVSEIKAGTHIFAVYGDNFFKTATYTIEALCAKSFEDTTVKLKEIEAQILRKRNELRQFETDYRKALARFQEVTNRYSQEKQSVDELLKQRENIHSSFTIARPVSNANGSSSGSGKGPSEEFKAESQGEDDGKDKSTKKKWFNLNMKGSDKKLG* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01283 405 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Eupl11g01283 405 PRINTS DnaJ domain signature 18 36 IPR001623 -
Eupl11g01283 405 PRINTS DnaJ domain signature 73 92 IPR001623 -
Eupl11g01283 405 PRINTS DnaJ domain signature 53 73 IPR001623 -
Eupl11g01283 405 PRINTS DnaJ domain signature 36 51 IPR001623 -
Eupl11g01283 405 FunFam Chaperone protein dnaJ 16 1 98 - -
Eupl11g01283 405 MobiDBLite consensus disorder prediction 373 405 - -
Eupl11g01283 405 MobiDBLite consensus disorder prediction 350 405 - -
Eupl11g01283 405 MobiDBLite consensus disorder prediction 350 368 - -
Eupl11g01283 405 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Eupl11g01283 405 Gene3D DnaJ domain 2 97 IPR036869 -
Eupl11g01283 405 Pfam DnaJ domain 16 78 IPR001623 -
Eupl11g01283 405 CDD DnaJ 16 70 IPR001623 -
Eupl11g01283 405 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 403 - -
Eupl11g01283 405 Coils Coil 286 341 - -
Eupl11g01283 405 SUPERFAMILY Chaperone J-domain 13 90 IPR036869 -
Eupl11g01283 405 MobiDBLite consensus disorder prediction 1 30 - -
Eupl11g01283 405 SMART dnaj_3 15 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01283 Eupl-Chr11 18774899 18789288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01283 9 88 C2H2 Transcription Factor Family AT1G74250 42.353 1.75e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01283 - - ming:122080374 709.909