Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01271 ATGGCGAAAACCGCTCTCAGGGTTCGAAGTTTTCTTCTCTGTCTCCTTCTCCAGCATTTCTCTCTCGCACAGGCTTCCTTAAATCCTGATTTCGAAGCTTTAATGGCGTTCAAAGCCACTTCAGATACTGCCAACAAGCTCACCAGCTGGAACGAAACCGCCGATACTTGCACCTGGTATGGCGTTTCATGTCTCCAAAACCGTGTTTCCCATCTCGTTCTCGAAGGACTCGATCTCCATGGCAGTTTCACTTCACTAACTTCTCTAAACCAGCTTCGCGTATTGAGTCTCAAGCGAAACCGCCTTTCAGGTCCCATTCCCGATCTCTCTAAACTCACTGCACTAAAGTTGCTTTTCCTTTCTTATAATGACTTCTCTGGCGAGTTTCCGGCATCTTTACTGTCTCTTTTCCGGCTATACCGTCTCGACCTGTCTTACAACAACTTCTCCGGTCAGATTCCGGCGGATATGAACCGTTTAACACACCTTCTCACTCTCCGCCTTGAAGAAAATCACTTTTCCGGTTTCATTTCGAGTTTAAATCTCCCGAATCTGGAAGATTTTAATGTTTCCGGAAACCGCCTCACAGGAGAAATCCCGAAAATGTTATCCGGCTTTCCTGAAACCGCGTTTGATCGAAATCTGGTTTTATGTGGGTTGCCATTACCGATCTGCAATGACATCAACCCGAGTAAGCCTAGATTTGACGGTGCCGTCGCCGTCGACTCGCCGTTAAGTCCGGTCAACGGAAACCCCGCTGTTGTTTCCTCCTCTCCGACTTCGAAACCTGAGGTCTCACCGTCTAGTAAATCGTCAAATACTCGCCGTAGTGGAACTGGAAAGATAAGTGTACTCGCCCTGGTAGCGATTATAGTCGGCGATGTTTTGGTTCTCGCTCTAATTTCAGGACTCGTGTTCTGTTATTTTTGGAGAAATGTGGCGGGAAAAATGAGAGCTGGCAAGGGCTCGCAATTACTCGAAGGCGAAAAAATCGTTTACTCGTCCAGTCCGTACCCGTCGCAAGGCGGTTTCGAGAGAGGAAACATGGTTTTCTTCGAAGCTGTGAAGCGGTTTGAGCTGGAGGATTTACTTCGAGCTTCGGCTGAAATGCTGGGGAAAGGCTGTTTTGGAACGGCATATAAAGCGATTTTGGAAGATGGTAACGTCGTCGCCGTTAAACGGCTTAAAGAAGTTCAGGTTGGAGGGAAACGTGAGTTAGAGCAACACATGGAGTTGTTGGGACGGTTACGGCACCCTAACGTCGTTAGTTTGAAGGCTTATTACTACGCCAGAGATGAGAAGTTGCTGGTCTACGACTACATGCCTAACGGCAGCTTGTATTGGCTTCTCCACGGTAACAGAGGACCAGGTCGAACTCCTTTAGACTGGACGACGAGGCTGACGATCGCTGCCGGAGCGGCTCGTGGCCTTGCCTACATCCACCACTCATGCCGGTCGCCTAGACTCTCACACGGCAACATAAAGTCAACCAACGTTCTTCTGGACAAGGCTGGAAACGCCCGTGTATCTGACTTCGGCCTTTCCTTGTTTGCATCTCCTACTGCCACCCCCAGGTCGAACGGCTACCGTGCTCCCGAGATATCCGACGGTCGGAAATTTTCGCAGAAAGCGGACGTGTATGCTTTTGGCGTCTTGTTGCTGGAGATCTTGACAGGGAAGTGTCCGCTGGCTGTAGAGAATGGTGGGTACATTGGTGGAAGTGGTGGGGTTGTGGATCTTCCGAGGTGGGTCCAGTCGGTGGTGAGGGAGGAATGGACGGCAGAGGTGTTTGATCTGGAGCTGATGAGGTACAAGAATATTGAGGAGGAGATGGTGGGGTTGCTGCAGATCGCTATGGCATGCACTTCGGCTGCTCCGGATCAACGGCCCAGGATGGGTTATGTGGTCAAAATGATCGAAGAGATTCGTGGAGTGGAGGTGTCTCCCTCCCACGAGTCATTTTACTCGGTATCCGACTCGCCCTCCGTATCCGAAGACACGGGCGTGGCGAGTCAGTGA 2019 0.5052 MAKTALRVRSFLLCLLLQHFSLAQASLNPDFEALMAFKATSDTANKLTSWNETADTCTWYGVSCLQNRVSHLVLEGLDLHGSFTSLTSLNQLRVLSLKRNRLSGPIPDLSKLTALKLLFLSYNDFSGEFPASLLSLFRLYRLDLSYNNFSGQIPADMNRLTHLLTLRLEENHFSGFISSLNLPNLEDFNVSGNRLTGEIPKMLSGFPETAFDRNLVLCGLPLPICNDINPSKPRFDGAVAVDSPLSPVNGNPAVVSSSPTSKPEVSPSSKSSNTRRSGTGKISVLALVAIIVGDVLVLALISGLVFCYFWRNVAGKMRAGKGSQLLEGEKIVYSSSPYPSQGGFERGNMVFFEAVKRFELEDLLRASAEMLGKGCFGTAYKAILEDGNVVAVKRLKEVQVGGKRELEQHMELLGRLRHPNVVSLKAYYYARDEKLLVYDYMPNGSLYWLLHGNRGPGRTPLDWTTRLTIAAGAARGLAYIHHSCRSPRLSHGNIKSTNVLLDKAGNARVSDFGLSLFASPTATPRSNGYRAPEISDGRKFSQKADVYAFGVLLLEILTGKCPLAVENGGYIGGSGGVVDLPRWVQSVVREEWTAEVFDLELMRYKNIEEEMVGLLQIAMACTSAAPDQRPRMGYVVKMIEEIRGVEVSPSHESFYSVSDSPSVSEDTGVASQ* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01271 672 FunFam pollen receptor-like kinase 1 338 440 - -
Eupl11g01271 672 Gene3D Phosphorylase Kinase; domain 1 344 440 - -
Eupl11g01271 672 MobiDBLite consensus disorder prediction 250 277 - -
Eupl11g01271 672 Gene3D Transferase(Phosphotransferase) domain 1 441 656 - -
Eupl11g01271 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 645 IPR046959 -
Eupl11g01271 672 SUPERFAMILY L domain-like 39 206 - -
Eupl11g01271 672 Gene3D Ribonuclease Inhibitor 180 229 IPR032675 -
Eupl11g01271 672 Pfam Protein kinase domain 368 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01271 672 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Eupl11g01271 672 SUPERFAMILY Protein kinase-like (PK-like) 369 640 IPR011009 -
Eupl11g01271 672 ProSiteProfiles Protein kinase domain profile. 365 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01271 672 FunFam Nuclear pore complex protein NUP107 27 179 - -
Eupl11g01271 672 Gene3D Ribonuclease Inhibitor 28 179 IPR032675 -
Eupl11g01271 672 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Eupl11g01271 672 MobiDBLite consensus disorder prediction 652 672 - -
Eupl11g01271 672 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 441 652 - -
Eupl11g01271 672 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Eupl11g01271 672 CDD STKc_IRAK 371 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01271 Eupl-Chr11 18511889 18515136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01271 30 672 Receptor kinase-like Gene Family AT1G68400 63.746 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl11g01271 Pkinase 4.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01271 - - nnu:104602585 1002.28