LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g01270	ATGGATTCTCAAGCGATGAAGAAGGCCTTGTATCGTGCTAAATTGAAAGATGCCGCACAGAAACGGGAGAAACGCATAGATTCTCCTCTCGTAAGGTACAATGAATATGATCAACCAGTCTGCAGGGTTTGTGATGTCACTCTGAAATCTGAATCCCTCTGGGCTGCACACCAAGCTTCCCGTAAACATCACGAGGAGATTCATAAATGTCATCTGATGGGTATCCAATGTGGAGGAAATCTGAAAAGAATTGAATATATCATTCAGCCATGTCATAGAAGCAGCAATGAGATTCTAATTCTTCAGGCAATTAAGAATGTCAAAGCTACTGCAGCTGGACTAACACAGATTAATGATGCAAAATCTGAGCCCCTTACAGAGTTGATACATAAACCTCGGCCATCATCCACTCTTCCAGCAGATTTTTTTGATAAGCATGAAACAAAGAGGCAAAAAATTGGATTGGGTACTGGGGGCAAGATTGAATCTGTCACTCAAGCTTCTGTGAAGTCGGTGGATTCTGGTTCATCTCCCAAGACATATGGAAGGGCAGAAGGTTCTGCTCTAACGCATCCTATGAAGCCATTTGATTCAGAAAACCAGACAGATGAATCATCCAATGTTAATATAATGGATGCAAAAGGGAGAAGTGAAAGTAAGGCCTCCAGCCAGCATAGTCACACAACAAGAAAGGTGGGTAGCTCTGAAGTGAAGCAAGTGAAGGGAGTTCTTCCTGAAGGCGTCTTTGATAACAAGGATGCCAATGCAACAAAAAAGATGGGTGGTTCAGAAGTGAAGCAAGTGAAGGGAGTTCTTCCTGAAGACTTTTTTGATAGCAAGGAAGCCGATACAACAAAAAAGATGGTTGGTTCAGAAGTCAAGCAAGTAAAAGGAGGTCTTCCTGAAAGCCTTTTTGACAACAAAGATGCCCACACAACAAGAAAGATGGGTGATTCAGAAGTCAAGCAAGTGAAGGGAGCTCTTCCTGAAGGTTTCTTTGATAACAAGGATGCTGATCTACGGGCGCGTGGCATTGAACCTGTTAAGATCGATATCAAGGATGAGTACAAGGAATTTGAGAAGTTGATTCAAGATGACCTGCAGGATGTGGATGAGCGTTTGGAGGAAGAAGAGATCGATGCAGCTGAATTGAGAGAGGGAGAAGAATCTTTGGAGCAAAAGGCTTATAGGGAGAGAGTGGAAATGCTAAAGAAGAAGCAATTGGAGCTAAAGGCTGCTAGGTTTGGTGGGAAGAAAGGTGCGGCCATGGGCAAGGATTCGAGTGATGAAGAGTCGACGAGTGATGAAGATGACAATGAAGAAAATTTTGCAGTTGATTGGAGGGCTAAGCATTTGTGA	1359	0.4312	MDSQAMKKALYRAKLKDAAQKREKRIDSPLVRYNEYDQPVCRVCDVTLKSESLWAAHQASRKHHEEIHKCHLMGIQCGGNLKRIEYIIQPCHRSSNEILILQAIKNVKATAAGLTQINDAKSEPLTELIHKPRPSSTLPADFFDKHETKRQKIGLGTGGKIESVTQASVKSVDSGSSPKTYGRAEGSALTHPMKPFDSENQTDESSNVNIMDAKGRSESKASSQHSHTTRKVGSSEVKQVKGVLPEGVFDNKDANATKKMGGSEVKQVKGVLPEDFFDSKEADTTKKMVGSEVKQVKGGLPESLFDNKDAHTTRKMGDSEVKQVKGALPEGFFDNKDADLRARGIEPVKIDIKDEYKEFEKLIQDDLQDVDERLEEEEIDAAELREGEESLEQKAYRERVEMLKKKQLELKAARFGGKKGAAMGKDSSDEESTSDEDDNEENFAVDWRAKHL*	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl11g01270	452	MobiDBLite	consensus disorder prediction	417	452	-	-
	Eupl11g01270	452	SUPERFAMILY	beta-beta-alpha zinc fingers	37	67	IPR036236	-
	Eupl11g01270	452	Coils	Coil	360	394	-	-
	Eupl11g01270	452	PANTHER	UNCHARACTERIZED	1	69	IPR040050	GO:0003676\|GO:0005681\|GO:0008270
	Eupl11g01270	452	Pfam	Zinc-finger of C2H2 type	41	63	-	-
	Eupl11g01270	452	MobiDBLite	consensus disorder prediction	166	183	-	-
	Eupl11g01270	452	MobiDBLite	consensus disorder prediction	166	237	-	-
	Eupl11g01270	452	MobiDBLite	consensus disorder prediction	194	217	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g01270	260	452	C2H2 Transcription Factor Family	AT3G02860	45.045	4.59e-44	155

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g01270	K13104		-	pda:103705063	336.265