Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01268 ATGGCAGGCAAAAGGCTACTCAATAATGAATCTGATCACGACCCAGATCAGCCGGAGGGGAAACGGATTCGAACAAGACCTTCTTTCGCTGCTGTAATTAGTGAAGTTGTCATGGTGAAATCACTACAGAACTTCTGTTCAGCCTTGGAGCCATTGCTTCGAAAAGTGGTGAACGAGGAAGTGGAGCTTGGACTGAGACGAGGTGCACGTCCAATCTCTAGGTCTACTCCATTGCAAATCCAAGCACTAGAAAAATCAACCTTGCAACTTTGCTTCAGCAAAAAGCTCTCACTCCCAGTGTTCACAGGGAGTAAGATAGAAGATGAAGAAAGCAACCCAATTCAAATCCTACTCGTAGATGTTCATGGAGATCGAAGGGTTCCAACCAGCTTACCTTATCCAATTAAAGTAGAGATTGTCGTTCTCGACGGAGAATTCCCATCCGAAGATCGCGAAGATTGGACTAGCGAAGAATTTGATAGCAAAATTGTGCGAGAAAGAACAGGCAAGCGGCCATTGCTCACCGGAGACGTGCTTGTCACTGTGAGGGATGGTTTCGCTTCGATTGGCGATCTCGTGTTTACCGATAATTCGAGTTGGATTCGGAGTCGGAATTTCCGGTTAGCTGCAAGAGTGGCTCCGGGGAGTGGTCAAAGTGTTAGGATACGTGAAGCCACGACTGAGCCGTTTGTTGTCAAAGATCACCGGGGCGAATTGTATAAGAAGCACCATCCTCCATCCTTAAACGACGAGGTATGGCGTCTTGAGAAGATAGGGAAAGATGGGGCCTTCCATAAGAAGCTAACTGCCGAGGGCGTCAACACAGTTCAGGAATTTTTGAAGCTATGGGTCGTTGATCTTACCCGACTCCGAAATATATTAGGCATCGGGATGTCGGATAAGATGTTTGAAATAACAATTAAGCATGCTCAGAATTGTGTTTTGGGGAACAAGCAGTATATGTTTCGCGGGTCACGTTGTACCATCTTCTTAAATCCGATATGTCAAGTTGCAGGGGTCATGCATAATGGGCAGACATTCCCGATACGTGATCTAACTGGAGCTCAGAAGGCCTATGTTGAACGCCTGGCTAGAGATGCATATGCACACTGGAATTCGTTGGAAGAGGTTGATGGAATGCTGAATGAGACTGCTCTACTACCCCCAGGTGAATCAGCTGCAGCAGCACAGTATCCTAATCATCATCAAAACAATATGAGATCAAATAATCAACATTGCGGGCTTCTAATTGATGGATTTGTTGCAGTGCCATCGCCGACTAATGCGTGTGTACAATTTAGTGATTGGGCACAATATTCAGCGTATCTCGGCTCTCCAATAATTGAAAATGGTGCCATTTATAGCATGCCGGAATCGTCATCGGATGGTGACTCAACACCTTCAAGGGCTTTCTTCCCTCCAACATAG 1428 0.4601 MAGKRLLNNESDHDPDQPEGKRIRTRPSFAAVISEVVMVKSLQNFCSALEPLLRKVVNEEVELGLRRGARPISRSTPLQIQALEKSTLQLCFSKKLSLPVFTGSKIEDEESNPIQILLVDVHGDRRVPTSLPYPIKVEIVVLDGEFPSEDREDWTSEEFDSKIVRERTGKRPLLTGDVLVTVRDGFASIGDLVFTDNSSWIRSRNFRLAARVAPGSGQSVRIREATTEPFVVKDHRGELYKKHHPPSLNDEVWRLEKIGKDGAFHKKLTAEGVNTVQEFLKLWVVDLTRLRNILGIGMSDKMFEITIKHAQNCVLGNKQYMFRGSRCTIFLNPICQVAGVMHNGQTFPIRDLTGAQKAYVERLARDAYAHWNSLEEVDGMLNETALLPPGESAAAAQYPNHHQNNMRSNNQHCGLLIDGFVAVPSPTNACVQFSDWAQYSAYLGSPIIENGAIYSMPESSSDGDSTPSRAFFPPT* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01268 475 Pfam Calmodulin binding protein C-terminal domain 319 377 IPR046829 -
Eupl11g01268 475 PANTHER OS02G0177800 PROTEIN 1 414 IPR012416 GO:0005516
Eupl11g01268 475 Pfam Calmodulin binding protein-like N-terminal domain 88 235 IPR046831 -
Eupl11g01268 475 MobiDBLite consensus disorder prediction 7 23 - -
Eupl11g01268 475 MobiDBLite consensus disorder prediction 455 475 - -
Eupl11g01268 475 Pfam Calmodulin binding protein central domain 247 313 IPR046830 -
Eupl11g01268 475 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01268 Eupl-Chr11 18442283 18447913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01268 5 379 Calmodulin-binding Proteins AT5G57580 51.832 3.38e-130 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01268 - - nnu:104602601 601.668