Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01265 ATGCATCCCCAATTCTTCCCGTCTTCCTTTCTCTTCTTCTTCATCTTCTTCATATTTTTCAATGTTCCAATTTCTCTTTGTCACGATGATTATAGGTATTCCAATGGCAGTCTTGCGTCCGAGTGTGGAAACATTAAAGGCATCAGTTACCCTTTCGGGTCAAATGGTCGACCCGATTATTGTGGCCATCCGGGTTTCCAGCTCCAGCTCCAGTGCCCAAGTGCTTCCTTTGAGTTTGAGACAGAGGTTGCCAGATTGGATTCCTGGAACGATGTCTGTCCTTTGCAAGTTGATAACGATACCCTCGATTTCACTCTCTTTTACGACTGTCTCTGGGCTGCGGATGAGATCGGGTATCTCACCTCATGCTCATGCTCAGAGGATAACGGACCGTGCAACTTATTGTATACCACATTGTGCATGCATTCTTTCGCACATCTTTTTCTAGAGAACGTTGCAGACAACGACATAGCGTACAGCTTATCAATATCGTACACGCATTCTTTCATATCTCTTTTTATAGTTGTTGCAAGTGTCGCTATAGTAACCTCATTTGTTCTAGTGCTAAGTGGTTACTTGAGAAAGAACTTCCCATCATATAATTCAATTAATTCAATGGAGGAACAGAAATTGGGCAGCCAACATGCTAGCGCTTCGAAAAGTTTTATGCCGAAGATGATAATGATGATCCCTTATACAAAGAAAAAGAAGAAAGATCGAAAAGATTTGGCCTTCTTAAGGAATTCTGGATCCCTTGGTCTAAAAAGATATACGTATTCGGAAGTTAAGAAAATGACTAACTCCTTCCAAGATAAACTAGACCAAGGAGGTTATGGTGATGTCTTCAAAGGAAAGCTGCTTGAGGGCTCTTTGGCGGCAGTAAAGGTCTTGAGTGATTCTGAAGGTAATAGAGAAGAATTCATTAATGAGATTACGAACATTAGTAAGACTTCACATGTTAATATCGTCACTCTGCTAGGTTATTGTTTGGAGGGGCAAAAAAGAGTTCTTGTCTACGAGTTTATGCACAATGGATCTCTTGAAAAGTTCATATACGATGAAAAACCATTAAGAACAAATCCTCGCCTCGGATGGGAGACATTACACAAAATTTCCATTGACATTGCTCATGGATTAGAGTATTTGCACTATGGTTGTAAAATTCAAATATTACATTTTGACATAAAACCTCATAACATTCTTCTAGATCAAGAGTTTTGTCCAAAGATCTCCGGTTTTGAGCTTGCTGAACTATGCCCGGTAAGAGACAAAATCATTTCGATAAAGAGTGCCAAAGGGACTACCAGGTATATTGCACCAGAAGTGATAGATTGTGCTACTGGAGGAGTCTCACATAAATCAGATGTATATAGCTATGGAATGACGGTGCTTGAAATGGTTGGAGGAAGAAAGAATGTTAATCTAGAAGTAAAAAATAGTAGTGAAATATATTTTCCAAATTGGATATGCAATCGTCTCCATCTAGGTGAGGATCTTGGACTGCATGGTGTGACAACTGAAGAGGATGAAAAAATTGCACGAAAGATGATATTAGTAAGTTTGTGGTGCATACAGATCAATCCATCAGATCGGCCTTCAATGAAAAGGGTGTTGGATATGTTGGAAGGAAGCCTTGAAGCATTGCAAATTCCTCCCTTGCCAGTCATTTCTTCTCCTTAA 1680 0.3976 MHPQFFPSSFLFFFIFFIFFNVPISLCHDDYRYSNGSLASECGNIKGISYPFGSNGRPDYCGHPGFQLQLQCPSASFEFETEVARLDSWNDVCPLQVDNDTLDFTLFYDCLWAADEIGYLTSCSCSEDNGPCNLLYTTLCMHSFAHLFLENVADNDIAYSLSISYTHSFISLFIVVASVAIVTSFVLVLSGYLRKNFPSYNSINSMEEQKLGSQHASASKSFMPKMIMMIPYTKKKKKDRKDLAFLRNSGSLGLKRYTYSEVKKMTNSFQDKLDQGGYGDVFKGKLLEGSLAAVKVLSDSEGNREEFINEITNISKTSHVNIVTLLGYCLEGQKRVLVYEFMHNGSLEKFIYDEKPLRTNPRLGWETLHKISIDIAHGLEYLHYGCKIQILHFDIKPHNILLDQEFCPKISGFELAELCPVRDKIISIKSAKGTTRYIAPEVIDCATGGVSHKSDVYSYGMTVLEMVGGRKNVNLEVKNSSEIYFPNWICNRLHLGEDLGLHGVTTEEDEKIARKMILVSLWCIQINPSDRPSMKRVLDMLEGSLEALQIPPLPVISSP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01265 559 Gene3D Phosphorylase Kinase; domain 1 229 341 - -
Eupl11g01265 559 PANTHER RUST RESISTANCE KINASE LR10-RELATED 243 554 IPR045874 GO:0004672
Eupl11g01265 559 FunFam serine/threonine-protein kinase PBS1-like 233 341 - -
Eupl11g01265 559 ProSiteProfiles Protein kinase domain profile. 267 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01265 559 SUPERFAMILY Protein kinase-like (PK-like) 251 542 IPR011009 -
Eupl11g01265 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Eupl11g01265 559 Pfam Wall-associated receptor kinase galacturonan-binding 41 72 IPR025287 GO:0030247
Eupl11g01265 559 Gene3D Transferase(Phosphotransferase) domain 1 342 549 - -
Eupl11g01265 559 ProSiteProfiles Zinc finger SWIM-type profile. 108 151 IPR007527 GO:0008270
Eupl11g01265 559 Pfam Protein kinase domain 271 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01265 559 FunFam PR5-like receptor kinase 342 552 - -
Eupl11g01265 559 SMART serkin_6 267 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01265 Eupl-Chr11 18378260 18391310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01265 254 559 Receptor kinase-like Gene Family AT5G38280 53.871 6.24e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl11g01265 Pkinase 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01265 - - ming:122083810 437.573