Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01263 ATGGATCATAAATACATGTTCATGTTCAAAGTATTCATCCCTCTGTTCATAAAGATACAGACACTCATCTTCTTCTTAGTAGTTGAAACAACACTATCTGCAGACCCACAATTCGAAGCTTGCAAGCCTCGAAAATGTGAGAATGGCCCATTCATAAGCTACCCCTTTTGGATCCGTGGTGAGCAAGAATCCTACTGTGGATACCCGGGTTTCGAGCTTTCCTGCAACAACAGTCAGCCTGTCCTCAACTTGTCTAACAATGATTATATCATACGAGAAATCTCGTACGATAACCAGTCTATTTTGGTCTCTAATGCCGGAGTTTCGGATGGAACCTGTCCTCGTCCCATTCACAATCTCACCATTGATCACAATCGCTTCAGTTTTGGCCCTGCCCACGTCGACCTCTTCCTCTTCTTCAACTGCACCTCCCCGCTTCCTAATGAATACTTGCCCTATTCGTTTGTTGGTTGTACTACTAATGATTCAAGAACGTCTTTGGCCGTGTTTAGACTTGATCCAATGTTATTTCGCTTAAACTTCTCTGGAATATGTGAAACTCTAGTGGTTACCCCGGCTGATGGCGATGGAAAAGAAAGTGTTGGGGATGTTGCAAAATTCTTGAATAAGGAATTTCTTTTGAAATGGAATGTAAGTACCTGTAGCGAATGCGAAGGAAGTGGCGGGCGTTGTGGATTTAATTTCGACACACACGATTTCAGGTGTTTCTGCCCAGATCGGCCATATCTCGAGCGTTGCCGTGGGAACAAGGACAATCTGGGAAAAGCGATTGGAATTGCTCTATCAATTCTTGGATTTGTGATTTTACTAGCAACCGTATTCCTTTGCTCGAAAAGGAAATTCTCATCAATGCATCCAATGCTCCTTTGGAAGAAGAAAACCAAAACCAATCTAAATGTGGAGGCTTTCCTAAGGAATCATGAGTTCTTTGCTCCGAAAAGATATAGTTATTCGGATGTTAAGGTAATGACCGATTATTTTAAAGAGAAATTGGGCCAAGGAGGTTATGGTGGTGTGTTCAAAGGAAAACTACTCGATGGATGCTTGGTGGCAGTGAAGGTATTGGGCGAATCTAAAGGTAATGGAGAAGAATTCATTAATGAGGTCGCAAGCATTAGTCGGACTTCCCATGTTAATATCGTAAGTCTTCTTGGTTATTGTTCCGAGGGTCCCCATAGAGCTCTTATATATGAGTTCATGCCCAATGGATCCCTCGAGAAGTTCATCTATAATGAAAAATCACCAAAAATGCATGTCCTCCTAGGATGGGAAAATTTATACCAAATCACAGTCGGCATCGCTAGAGGGCTAGAGTACTTGCATCGTGGTTGCAACACGCGCATTCTGCATCTTGACATTAAGCCACATAACATTCTTCTTGACCAAGATTTTTGTCCAAAGATATCTGACTTTGGGCTCGCTAAACTATGTCCTAAAAGAGACAGCATCATATCAATGTCAGGTGCAAGAGGGACTATAGGGTATATTGCACCAGAAGTGATATTTAGAAACTTTGGAAGAGTTTCGCACAAGTCAGATGTCTATAGCTATGGAATGATGGTTTTAGAAATGGTCAGGGGAAGAAATAACATTGATATGGGAGTAGATGATACTAGCGAAATATATTTTCCACATTGGATCTATGAACGTCTGGAGCTAGACGAGGATCTAGGGTTACATGGGATTACGGTTCAAGAAGAAGGAGTAATTACAAGGAAGATGATTTTAGTAGGTTTGTGGTGCATACAGACAAATCCTTCAGATCGGCCTTCGATGAGTCAAGTGGTGGAAATGTTGGAAGGAAGCCTTGAATCCTTGCAAATTCCACCCAAGCCTTTCCTATCTTCTCCTTCCAAATCACTAGTAGGTTCTTCATCTATGTCATCTTCTACAATGTATCCAAATACATCTCAATCATGA 1941 0.4163 MDHKYMFMFKVFIPLFIKIQTLIFFLVVETTLSADPQFEACKPRKCENGPFISYPFWIRGEQESYCGYPGFELSCNNSQPVLNLSNNDYIIREISYDNQSILVSNAGVSDGTCPRPIHNLTIDHNRFSFGPAHVDLFLFFNCTSPLPNEYLPYSFVGCTTNDSRTSLAVFRLDPMLFRLNFSGICETLVVTPADGDGKESVGDVAKFLNKEFLLKWNVSTCSECEGSGGRCGFNFDTHDFRCFCPDRPYLERCRGNKDNLGKAIGIALSILGFVILLATVFLCSKRKFSSMHPMLLWKKKTKTNLNVEAFLRNHEFFAPKRYSYSDVKVMTDYFKEKLGQGGYGGVFKGKLLDGCLVAVKVLGESKGNGEEFINEVASISRTSHVNIVSLLGYCSEGPHRALIYEFMPNGSLEKFIYNEKSPKMHVLLGWENLYQITVGIARGLEYLHRGCNTRILHLDIKPHNILLDQDFCPKISDFGLAKLCPKRDSIISMSGARGTIGYIAPEVIFRNFGRVSHKSDVYSYGMMVLEMVRGRNNIDMGVDDTSEIYFPHWIYERLELDEDLGLHGITVQEEGVITRKMILVGLWCIQTNPSDRPSMSQVVEMLEGSLESLQIPPKPFLSSPSKSLVGSSSMSSSTMYPNTSQS* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01263 646 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Eupl11g01263 646 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01263 646 Gene3D Phosphorylase Kinase; domain 1 308 406 - -
Eupl11g01263 646 PANTHER RUST RESISTANCE KINASE LR10-RELATED 303 627 IPR045874 GO:0004672
Eupl11g01263 646 SMART serkin_6 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01263 646 ProSiteProfiles Protein kinase domain profile. 332 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01263 646 SUPERFAMILY Protein kinase-like (PK-like) 315 607 IPR011009 -
Eupl11g01263 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Eupl11g01263 646 MobiDBLite consensus disorder prediction 615 646 - -
Eupl11g01263 646 Pfam Wall-associated receptor kinase C-terminal 180 246 IPR032872 -
Eupl11g01263 646 MobiDBLite consensus disorder prediction 616 646 - -
Eupl11g01263 646 FunFam serine/threonine-protein kinase PBS1-like 299 406 - -
Eupl11g01263 646 CDD STKc_IRAK 338 608 - -
Eupl11g01263 646 FunFam PR5-like receptor kinase 407 618 - -
Eupl11g01263 646 Pfam Wall-associated receptor kinase galacturonan-binding 41 104 IPR025287 GO:0030247
Eupl11g01263 646 Gene3D Transferase(Phosphotransferase) domain 1 407 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01263 Eupl-Chr11 18311928 18320661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01263 23 635 Receptor kinase-like Gene Family AT5G38260 40.315 2.21e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl11g01263 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01263 - - ming:122076186 676.011