Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01248 ATGGATACCACAGTTGAAGAGTTCTTAAGTCAGTATAGGACTCAAACGCCGACAAGGTACTCTTATTCCCAAATAAAAAAGATGACCAAAAATTTCAACGAAAAATTAGGCCAAGGAGGATATGGCTCTGTGTTCGAAGGAAAGCTACTACATGGCCGTCTCGCAGCTGTAAAGATGTTGGGTACACGCAAGGGAAATGGGCAGGACTTTATCAATGAAGTCGCTACTATCGGAAGAGTTCATCATGTCAATGTGGTGCAACTCGTTGGATTCTGCTCTGAGGGATCAAAGAGAGCTCTTATCTATGACTTCATGCCTAATGGATCTTTGGAAAAGTATATATTCCCCAAAGAAGGAAAATACAATACTCTAAGTTGGGAAAAGATTCATGAGACTCGTGGGATTGAATATCTGCATCGAGGCTGTGACATGCGAATTCTACACTTTGACATCAAACCTCACAACATTCTTCTTGATGAGAACTTCACCCCAAAAATTTCAGATTTTGGGCTTGCAAAATTCTATCCGACAAATGAAAGTATTGGTTCAGTCACCGCTGTAAGAGGAACCCTGGGATATATGGCTCCTGAACTGTTTAATAGGAAAGTCGGCAGCGTCTCTTACAAGTCTGATGTTTACAGTTTTGGAATGATGTTGATGGAAATGACAGGCAGAAGGAAGAATGTGAATGCATTTGCAGAGAATTCAAGTCAATTTACTTCCCAATATGGATTTACGACAGGCTTGATCGAGGAGAAGACATGGAATTGGAGGATGCAACAGAGGAGGAGAAGGAAACAGCAAAGAAGTTGA 813 0.4121 MDTTVEEFLSQYRTQTPTRYSYSQIKKMTKNFNEKLGQGGYGSVFEGKLLHGRLAAVKMLGTRKGNGQDFINEVATIGRVHHVNVVQLVGFCSEGSKRALIYDFMPNGSLEKYIFPKEGKYNTLSWEKIHETRGIEYLHRGCDMRILHFDIKPHNILLDENFTPKISDFGLAKFYPTNESIGSVTAVRGTLGYMAPELFNRKVGSVSYKSDVYSFGMMLMEMTGRRKNVNAFAENSSQFTSQYGFTTGLIEEKTWNWRMQQRRRRKQQRS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01248 270 Gene3D Phosphorylase Kinase; domain 1 3 104 - -
Eupl11g01248 270 ProSiteProfiles Protein kinase domain profile. 30 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01248 270 Gene3D Transferase(Phosphotransferase) domain 1 105 268 - -
Eupl11g01248 270 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 239 IPR045874 GO:0004672
Eupl11g01248 270 FunFam Os07g0541700 protein 105 190 - -
Eupl11g01248 270 FunFam serine/threonine-protein kinase PBS1-like 2 104 - -
Eupl11g01248 270 SMART serkin_6 30 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01248 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Eupl11g01248 270 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Eupl11g01248 270 SUPERFAMILY Protein kinase-like (PK-like) 8 235 IPR011009 -
Eupl11g01248 270 Pfam Protein kinase domain 33 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01248 Eupl-Chr11 17839284 17840096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01248 20 226 Receptor kinase-like Gene Family AT1G66910 54.717 1.19e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl11g01248 Pkinase 8.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01248 - - ming:122090156 386.341