Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01236 ATGGAGCCACCTCCGCTACCACTTTCCACCACCACCACCACCACTCACCTCGGCTACCCCGATTCAGTCGATTCGTCTCCCCGTTCCCGCAACACCGATTCATGGGACGATCCTTTCCCACCCGCCCCGGGTGCTAAACTGCGCTTGATGTGCAGCTACGGTGGCCACATAGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACCTAGGTGGTGACACCCGCATCATCGTCGTGGACCGCCACTTCTCCCTCGCGGACATCTCCCTCCATCTCTCTCGCAGCCTCCTCAACGGCCGTTCCTTCACCCTCAAATACCAACTCCCCAATGAAGACCTCGACTCCCTCATCTCCGTCACCACCGACGAAGATCTCGACAACATGATCGAAGAGTACGACCGCAGCTCCTCTTCTTCCCTCAAGCCCTCCCGTCTCCGACTGTTTCTCTTCCCTTCCAAGCCCGAATCTTCCTCTTCGATTGGATCACTTCTTGACGACTCCAAATCAGAGACTTGGTTCGTCGACGCCCTCAATGGTTCCGGAATTTTGCCGAGAGGACTCTCCGCAGATTCTGCTACTGTTAATTGCTTACTGGGTCTCGATGATGTTGTTCATCATGTTGATACTTCTATAGATGTGGAAGCTCAAAATGACACTCAGGGGATTATTAACAAACAGGTTAAGCACGGTCAGGATGTTCATTCGATTCCCGATTCGCCTTTAGTGGAGACTAGTTCGTCGTTTGGTTCTACTTCTTCTTCGCCTTCCATGTCGAACTTACCTCCGATTCGGGTTCACGTTGAGGATCAGAAAGTTGGGTTAGACGAACATTTCTCACAGCTGACTGTCGACGCCGCTGCAGCACATAAACAAGATGAAGCTTTTGTTGTTATGTGTTCTCCGCCTCCTCTTCCAACTATTATTGCAACAGGAGTTCCCGCTGTGACGATCAATTCTACTACTGTTGTTAGCGAAAACCCGAATCGGCTTTACTCCGACGACGAAAGATCAGACCAGGGAGTGTCAATTGGGTTCCGGAAACCACCGCAGCCGCCACCGTCGCAATTGCAGCAGAAAACTAGCGGTGGTATTGATTTGTCATCACCGGATGGAAGTACAAGAGATAACAGTACTCCAAATATGATTTCTCGTGCAAAACCCATGTTTTATCAAGACCCAGTTGTTCCAATTGCCTCTAGAGACAACCGGGTCTCTGCTAATCCTGCTGATCCGAAGCGGGATTTATCCGATCCCAGCTATCGGATCCAGATGCAACAAGTTCAGGATTCTGGGTATGTGTTACATTCACAATTCGATCAACAGCAGCAGCTGCAACAACAACAACAACAAAAACAATTCGTTCATGCCGGCGCACATTACATACAGCAACACGCCACAGGGCCGGTACCAATGTCTTCTTACTACCCGATGTATCCACAGCAACAACAGCATCCCCACCACCAACTTGAACAGCAGTACTCAATGTACTTCGTGCCCATTCGGCAAACCCAACCTTACAATTTGTCTGTGCAATCCAATTTGAGCGACGCGGATGCGGCCACCATTACCGCGAGTCGGCCTCCTATGCCTCCGAATCCTTCTATGATCCCCACTCCTGCCGCGTACAAAGAACCCGCTGCTCCTGTAATCCAAACAAGGTCTGTTCCTCCCTCTAAACATGAATTGGCCTCAAATGTATACAGAACAGGTGCCGCCGCAGCTCCACCGCTTGTTCACATGCCTTCAGATCAGCAACAATATGTGGGTTACCATCAAATGCATCACCCATCTCAGTCTATCGCCGCTACTGCCAATTATGCTTACGAATTCACAGATCCTACACATGCTCAGATATACTACACTCAGGCCCCGGCATCCACATTGCCTTCTCAATACCAGACCATGAACTTGGCACCTGCGACAGTAGCATCGGAGACTTCGGCGCAGCTGCCCTTAGACAACACTAAGCAACAGATCAGAACCTCATAA 1986 0.507 MEPPPLPLSTTTTTTHLGYPDSVDSSPRSRNTDSWDDPFPPAPGAKLRLMCSYGGHIVPRPHDKSLCYLGGDTRIIVVDRHFSLADISLHLSRSLLNGRSFTLKYQLPNEDLDSLISVTTDEDLDNMIEEYDRSSSSSLKPSRLRLFLFPSKPESSSSIGSLLDDSKSETWFVDALNGSGILPRGLSADSATVNCLLGLDDVVHHVDTSIDVEAQNDTQGIINKQVKHGQDVHSIPDSPLVETSSSFGSTSSSPSMSNLPPIRVHVEDQKVGLDEHFSQLTVDAAAAHKQDEAFVVMCSPPPLPTIIATGVPAVTINSTTVVSENPNRLYSDDERSDQGVSIGFRKPPQPPPSQLQQKTSGGIDLSSPDGSTRDNSTPNMISRAKPMFYQDPVVPIASRDNRVSANPADPKRDLSDPSYRIQMQQVQDSGYVLHSQFDQQQQLQQQQQQKQFVHAGAHYIQQHATGPVPMSSYYPMYPQQQQHPHHQLEQQYSMYFVPIRQTQPYNLSVQSNLSDADAATITASRPPMPPNPSMIPTPAAYKEPAAPVIQTRSVPPSKHELASNVYRTGAAAAPPLVHMPSDQQQYVGYHQMHHPSQSIAATANYAYEFTDPTHAQIYYTQAPASTLPSQYQTMNLAPATVASETSAQLPLDNTKQQIRTS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01236 661 CDD PB1_UP2 50 149 - -
Eupl11g01236 661 SMART PB1_new 61 151 IPR000270 GO:0005515
Eupl11g01236 661 MobiDBLite consensus disorder prediction 240 259 - -
Eupl11g01236 661 MobiDBLite consensus disorder prediction 7 33 - -
Eupl11g01236 661 MobiDBLite consensus disorder prediction 240 260 - -
Eupl11g01236 661 Pfam PB1 domain 62 150 IPR000270 GO:0005515
Eupl11g01236 661 MobiDBLite consensus disorder prediction 355 383 - -
Eupl11g01236 661 Gene3D - 66 150 - -
Eupl11g01236 661 MobiDBLite consensus disorder prediction 1 39 - -
Eupl11g01236 661 MobiDBLite consensus disorder prediction 325 417 - -
Eupl11g01236 661 PANTHER OS05G0427100 PROTEIN-RELATED 19 482 - -
Eupl11g01236 661 SUPERFAMILY CAD & PB1 domains 62 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01236 Eupl-Chr11 17575685 17578242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01236 45 221 MAP Kinase Kinase Kinase AT1G79570 36.723 7.78e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01236 - - nnu:104605920 805.823