Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01230 ATGGAGTGTATCGCCAGCAGCTCGGTAACCAACTCCGGTGCCTCCGGTCGTTCTCTCCGTGTTTTGTTGGTGGATGCTGATTCTACATCTATTCAGATCTTAAAGAACTTGCTTGAATCATGCTCACATGAAGTAACTGTTGTCGAAGGAGCATCCATTGCCTTGTCCATGGTTCAGGAGAGAAGGTGTCAATACGACATTGTCCTAATTGATGTCGACGTGCCTGACATGAACGCATTCGCGCTTATCAAAGTCATAGTGCATATAACAACCCTACCTGTCATTTTAATGTCAGGTAATAATGAATTGTCCATTGCCAAGAGAGCGCTTGAAAATGGAGCCTGTTTCTTTCTTGTGAAACCTATTAGCATTGAGTTCATTGAAAACATGTGGCAACATGTTTTTCAAAATAAGAAAGCTGAGATTAAGCAAATAGAAGAGGCGGGGAGTTTAGAGAAGGAAGAGCCCGAAAACTCTGATTTAGATAACTCTGATTGCTCCATGATTAATGAAAGGAACCAAAACCAAAGGAAATCCATAAGAGAGACACTGAAAGAGGATGAAGTTGAAGGCAGATGTGACACAAATGAAGGCAATCTGAAACCAAAAAAGTCAAGGAGAAAGACAGACAAAGAGGGGGAAGAAGGTGGTCATACTACTAAGAAGCCACGATTAATATGGGATGACAATAATCTCGACCTTAAATTTCATGACGCAATGAAGCAATTAGATCCCAAAAGTAAGATTTTTTTTTAA 756 0.4048 MECIASSSVTNSGASGRSLRVLLVDADSTSIQILKNLLESCSHEVTVVEGASIALSMVQERRCQYDIVLIDVDVPDMNAFALIKVIVHITTLPVILMSGNNELSIAKRALENGACFFLVKPISIEFIENMWQHVFQNKKAEIKQIEEAGSLEKEEPENSDLDNSDCSMINERNQNQRKSIRETLKEDEVEGRCDTNEGNLKPKKSRRKTDKEGEEGGHTTKKPRLIWDDNNLDLKFHDAMKQLDPKSKIFF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01230 251 ProSiteProfiles Response regulatory domain profile. 20 135 IPR001789 GO:0000160
Eupl11g01230 251 MobiDBLite consensus disorder prediction 148 226 - -
Eupl11g01230 251 Coils Coil 170 190 - -
Eupl11g01230 251 Gene3D - 18 210 - -
Eupl11g01230 251 SMART REC_2 19 130 IPR001789 GO:0000160
Eupl11g01230 251 Pfam Response regulator receiver domain 21 127 IPR001789 GO:0000160
Eupl11g01230 251 MobiDBLite consensus disorder prediction 175 226 - -
Eupl11g01230 251 CDD REC_typeB_ARR-like 21 135 - -
Eupl11g01230 251 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 237 IPR045279 GO:0009736
Eupl11g01230 251 SUPERFAMILY CheY-like 17 158 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01230 Eupl-Chr11 17454271 17456156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01230 10 243 Response Regulator Gene Family AT4G16110 33.054 2.19e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl11g01230 Response_reg 1.1e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01230 - K14491 ming:122064557 152.14