Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01227 ATGGTGAGAAATTGTGAATTCTGTGGTGAATCGACGCCGTCTGTTTACTGCAAGGCAGATGCAGCACGTCTTTGCCTTTCTTGTGATGCGCGAGTTCATTCGGCTAATGCTCTGTCGAAGCAGCACTTCCGAGCCCTTCTATGTGAGGGTTGTGGGAACGACCCAGCTTCTGTGCAGTGCTTGGATCATCGGCTCTTTATGTGTCGTAGTTGTGACCGGAACATGCATGATGATGTCACGGCACAACATCAGAAACGAGTGTTGAAAAGTTACACCGGGTGCCCTTCTGCTAGAGATTTTGCTGTGTTATGTGGCTATGATCTGAATGAACTTGGGCCTAGGTGTTCTCAAGATTTGGCTGTCTCCACTTCATATGGTTTTGGGGTTCGGGACGTGGCAAATGCGGACAATTTAAAGGAGTTCCGCCCATGGATTGAAGAGTCTTCTTCGACATCTCAAGTGAGCTCCATGACTTCAATGTTTGGTGCAGACTCTGAACTAGGATCGAGCAATCCGCAAAGCAAGATACTTTGTGCAAATCGACAGCAGCCGGACACTCGACTTGTTCTGCAACAAATTCTTGACCTGGAATGGCTTCAGCTCACTGAGAGAAACAATCATTCTTCTATGATATGTGGGCAGGTGAAAACTGATGTATATTCATCCAAAGATAAGACTTCAGGGAAGCCTGCTGAATATCTTGAACAGAATTGCCAACATCCTCAAGCTCAAGGTCTTGGTGTTGATCTTCAACAAGTGGGCAGTGTGCAGCATGAGCTACAAGCACAACCTTTTCCTTCCCCTTTCTCTCAACTGGAGCACCTAAACTCGTCTTCGAGTGGTGGAATCCCTCTGCATGGAGACAATTTTTGGCAGTGCAAGAGTCCAGCTCAGGGTAGCCAGCTGTGGTCTCAAAATATGCAAGACCTTGGAATTTGTGAAGAAAATGATTGCAATGATGGTCTTAACATACCTGATGTTGATCTGACATTCCAAAATTATGAAGAACTTTTTATGGGTGATAACGATCAACCTAGATCACTGTTTGATGAAATAGGCGTGGCTTACTCTTCCATGGAGAAGGATTTATCCCTTGACAAATCAGTTTATGGCTGCCGGAGAGCTATTGAGGATGTCTCAGTGGCCCCATCTGTTTACATCACTCAGTCATCTCATGAAAACAAAGATATTGGTCCTTCTGACCAAGCTCGTCACTTTGCCAGAAGCATGGATTCTCCTCGTCCAATTCGACCATCTTACTCAAGTTTATCATTCTCTCTTTCAATGCTCAGTGCTGAAACCAGTGCTTCTGATTATCTTGATAGCGGACTTTCGCCCAACACTATGAAAGGGGAACCGCCATGGAATTCACCGGATCTGGCAAGCGAACATTCTGAAGCCAGAGGAAATGCCATGATGAGGTACAAAGAGAAGAAGAAGGTTCGAACGTGA 1452 0.4559 MVRNCEFCGESTPSVYCKADAARLCLSCDARVHSANALSKQHFRALLCEGCGNDPASVQCLDHRLFMCRSCDRNMHDDVTAQHQKRVLKSYTGCPSARDFAVLCGYDLNELGPRCSQDLAVSTSYGFGVRDVANADNLKEFRPWIEESSSTSQVSSMTSMFGADSELGSSNPQSKILCANRQQPDTRLVLQQILDLEWLQLTERNNHSSMICGQVKTDVYSSKDKTSGKPAEYLEQNCQHPQAQGLGVDLQQVGSVQHELQAQPFPSPFSQLEHLNSSSSGGIPLHGDNFWQCKSPAQGSQLWSQNMQDLGICEENDCNDGLNIPDVDLTFQNYEELFMGDNDQPRSLFDEIGVAYSSMEKDLSLDKSVYGCRRAIEDVSVAPSVYITQSSHENKDIGPSDQARHFARSMDSPRPIRPSYSSLSFSLSMLSAETSASDYLDSGLSPNTMKGEPPWNSPDLASEHSEARGNAMMRYKEKKKVRT* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01227 483 CDD Bbox1_BBX-like 5 47 - -
Eupl11g01227 483 MobiDBLite consensus disorder prediction 441 483 - -
Eupl11g01227 483 MobiDBLite consensus disorder prediction 390 414 - -
Eupl11g01227 483 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Eupl11g01227 483 MobiDBLite consensus disorder prediction 397 411 - -
Eupl11g01227 483 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 482 - -
Eupl11g01227 483 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Eupl11g01227 483 SMART bboxneu5 1 47 IPR000315 GO:0008270
Eupl11g01227 483 SMART bboxneu5 48 88 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01227 Eupl-Chr11 17411205 17427633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01227 1 368 C2C2-CO-like Transcription Factor Family AT1G68190 34.865 5.23e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01227 - - ming:122081741 553.518