Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01225 ATGGATTTGAACCAATCGGGACGCTTCCAATCATCTTCATCCCCAGTTACGCAGATGCACAACTTCATGCACGTACCCTCTCCCTTGGTACCTCGTAACCAGCAGCAAACAAATGAGGTGGGAGAAGGGAGTATGCACTCTCGTGCCATGCAATTACAAAAGCAAAACCTGCAGTTGTTCTGGCATCAACAAATGCTAGAAATCGATCAACTTTCAGACTTTAAGCAGCATCAGCTTCCCCTTGCAAGGATCAAGAGGATAATGAAATCAGATGAAGATGTGAAGATGATAAGCGCGGATGCTCCTGTCCTATTCTCGAAAGCCTGTGAGCTCTTTATTCTCGAGCTCACACTCCGTTCATGGTTCCACACTGAAGAAAATCGGAGGCGAACTCTACAGAGGGCTGACATCGCGAATGCTGTGAACCGTGGAGAGGTTCTTGATTTCTTGCTCGACATTGTTCCAATGGATGACACTCATGAAACTAAGGAATTCATAAGGCAACAAGAAATTCCTCAACAATTCGTGATTCAAGCGCCAATGTCCCCTAACCAGCTCATCTACGAAAATGCTCCCCAGAAGTCTCCAGAGAAGTCCGAAAGTGGGAGGTTCGTGAGATTGCAAAACATCTTCGATGTCTTCTCGTCTCCTCTTTGGAGAATCATAAACAGTGGCAAAAACCTGACAGTGGCGGAGGAGCGGTGCGGTGATGGCGGAGAGAAAGAGGAGAGGAGGGAAAGGGAGATAGAGCTACCGGAACTTATAGGAATGGGTTCTTTGGGAAGACGAAAGACCAAGCTTCTTCTCGTTTCATTTGTGCTTTGGAATGAGAGAGATAGAGAGTTTAGTCAATATTCTTGCCAAGGCCCCCCATCCCAATGA 882 0.4671 MDLNQSGRFQSSSSPVTQMHNFMHVPSPLVPRNQQQTNEVGEGSMHSRAMQLQKQNLQLFWHQQMLEIDQLSDFKQHQLPLARIKRIMKSDEDVKMISADAPVLFSKACELFILELTLRSWFHTEENRRRTLQRADIANAVNRGEVLDFLLDIVPMDDTHETKEFIRQQEIPQQFVIQAPMSPNQLIYENAPQKSPEKSESGRFVRLQNIFDVFSSPLWRIINSGKNLTVAEERCGDGGEKEERREREIELPELIGMGSLGRRKTKLLLVSFVLWNERDREFSQYSCQGPPSQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01225 293 FunFam Nuclear transcription factor Y subunit gamma 45 156 - -
Eupl11g01225 293 MobiDBLite consensus disorder prediction 26 48 - -
Eupl11g01225 293 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 50 200 - -
Eupl11g01225 293 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 78 141 IPR003958 -
Eupl11g01225 293 Gene3D Histone, subunit A 43 156 IPR009072 GO:0046982
Eupl11g01225 293 SUPERFAMILY Histone-fold 38 150 IPR009072 GO:0046982
Eupl11g01225 293 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01225 Eupl-Chr11 17370865 17387723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01225 57 180 CCAAT-HAP5 Transcription Factor Family AT1G56170 60.484 8.85e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Eupl11g01225 CBFD_NFYB_HMF 2.3e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01225 K08066 - psom:113277638 244.202