Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01224 ATGTCTTCACCTCTCAGCCTCATTTTTTACCTTTCCTTACTCTACGTAGGAAGAATAACTGCAGAAGATAGATACGGCGAAACTTTCTTCAGAGATTGCCCAGTTACAAGATGCAGCAAAAGAGGCCCCGACATCAGATTCCCATTCCGACTCGGAACCCAGCCACCATTTTGCGGCCTTAAAGGGTTTGAATTATCATGCTTAAATGAGGATACCCTTATCCATCTTCCTTTCTCAGGTGACTACTATGTCCGTGAAATCGATTATCGTAATTACATAATCTCCATGATCGATAGAGAAGAAACGTGCCCGTTGCAAAGCCTTATCTCCCTCAACCTCTCAAGTTCGATCTTCAACTTCCCCGGGACTACTTTTGCTGTAGTGAATTGCACCAAAAGCATGATAGATAGTACACAAGCTGGATTAATTGGCCCAATCAATTGCCTCAGCGACGACAATTATTTAGTTTTCGTGGCAAGTCCTGGCACATCAATGGATAAGCTGCCTTCAAATTGTGGAACATCTCGAACAGCTGAGATTATGGGTGATATCGAGAAGCTCCTTGAAACAGGAGAGATCATCGTCAGTTTGAATGCTCCAGGCATATGCTTTGAATGTGAACGACAGGGGAATCGTTGTGGATTTAACAGTACAAGGAACGAAACCGTCGTCTGTTTTCTCCGTCATAGACTCCATGGTTCTCGTACTTCATTAATCATAGGCATAAGCATAGGAGGCGCGATCGTTCTTTTATCGGTGATACTTGTTCTTTTCTACAAATTTAAAAAATCCGACAAGGAAAAAGAAACACAACTGAAGGTAGAAAGGTTTCTAGCAAACCACAAGTCCCTCAATCCCACTAGATATACTTATGCAGATATTAAGAAAATGACCCACAGGTTTAAGCACAAATTGGGTCAAGGGGGATTTGGAAGTGTATATAAAGGGAAGCTTCACAATGAAATTCCAGTGGCAGTTAAGATGCTTGAGAATTCTAAAGGAAATGGAGAAGACTTTGTCAATGAAGTGTCTACCATTGGTAGGATCCACCATGTCAATGTGGTTCGTCTTCTAGGGTTCTGCTCGGAAGGAACTAGGCGTGCGCTTATCTATGAATTCATGCCCAATGAATCACTAGAGAAGTTCATATTCTCAAAAGAAGGTAAAATGATTCATCGACCATTGAGTTGGGAGAAGCTACAAGAAATTGCAATCGGCATTGCTCGTGGGATAGAGTATTTGCACCAAGGTTGCGACCAACGCATCCTCCACTTTGACATTAAGCCTCACAATATTTTACTAGACAATAACTTCCACCCAAAGATTTCTGATTTCGGGCTTGCCAAGTTATGCTCAAAGGAACGAAGCATTGTATCTATGACTGCTACTAGGGGAACTATGGGCTACATTGCACCTGAGCTCTTCTCGAGGAACTTCGGAACAGTCTCCTATAAATCAGATGTTTATAGTTTTGGAATGTTGATGTTGGAGATGGTTGGGGGAAGGAAGAATATTGATGTCAATGTTGAAAGTTACAGCCAAATTTATTTTCCGGAATGGATTTATGATCGATTGATACAAGGAAAAGAGCTTGGATTAGTAGTTCAGATGGAGGGAGAAGAAGAAATTGCGAAGAAGCTCGCAATTGTAGCGCTATGGTGCATACAATGGAATCCGACTGATCGCCCTTCCATGACGATGGTGGTCCAAATGCTGGAAGGGAGCTTACAAACCTTGAAGATACCTCCCAAGCCGATCGTTTCTTCTACTGATACTGAGAGCAGAGCAACCTAA 1794 0.4225 MSSPLSLIFYLSLLYVGRITAEDRYGETFFRDCPVTRCSKRGPDIRFPFRLGTQPPFCGLKGFELSCLNEDTLIHLPFSGDYYVREIDYRNYIISMIDREETCPLQSLISLNLSSSIFNFPGTTFAVVNCTKSMIDSTQAGLIGPINCLSDDNYLVFVASPGTSMDKLPSNCGTSRTAEIMGDIEKLLETGEIIVSLNAPGICFECERQGNRCGFNSTRNETVVCFLRHRLHGSRTSLIIGISIGGAIVLLSVILVLFYKFKKSDKEKETQLKVERFLANHKSLNPTRYTYADIKKMTHRFKHKLGQGGFGSVYKGKLHNEIPVAVKMLENSKGNGEDFVNEVSTIGRIHHVNVVRLLGFCSEGTRRALIYEFMPNESLEKFIFSKEGKMIHRPLSWEKLQEIAIGIARGIEYLHQGCDQRILHFDIKPHNILLDNNFHPKISDFGLAKLCSKERSIVSMTATRGTMGYIAPELFSRNFGTVSYKSDVYSFGMLMLEMVGGRKNIDVNVESYSQIYFPEWIYDRLIQGKELGLVVQMEGEEEIAKKLAIVALWCIQWNPTDRPSMTMVVQMLEGSLQTLKIPPKPIVSSTDTESRAT* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01224 597 ProSiteProfiles Protein kinase domain profile. 299 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01224 597 FunFam serine/threonine-protein kinase PBS1-like 264 373 - -
Eupl11g01224 597 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Eupl11g01224 597 Gene3D Transferase(Phosphotransferase) domain 1 374 582 - -
Eupl11g01224 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Eupl11g01224 597 Gene3D Phosphorylase Kinase; domain 1 271 373 - -
Eupl11g01224 597 FunFam PR5-like receptor kinase 374 584 - -
Eupl11g01224 597 CDD STKc_IRAK 305 574 - -
Eupl11g01224 597 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Eupl11g01224 597 Pfam Wall-associated receptor kinase galacturonan-binding 33 98 IPR025287 GO:0030247
Eupl11g01224 597 Pfam Protein kinase domain 302 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01224 597 PANTHER RUST RESISTANCE KINASE LR10-RELATED 269 590 IPR045874 GO:0004672
Eupl11g01224 597 SMART serkin_6 299 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01224 Eupl-Chr11 17345305 17348692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01224 203 594 Receptor kinase-like Gene Family AT1G66910 45.499 6.05e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl11g01224 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01224 - - vri:117913006 758.829