Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01190 ATGTCGGAAGTCGATCAGTTTTTATCCAAGAAAGTTGCAGATCGATACCTCAAGCGCGAGGTCCTCGGTGAGGGAACTTATGGAGTCGTCTACAAGGCCATCGATACCAAGACAGGACAGACGGTTGCGATTAAGAAAATTCGATTAGGGAAGCATAAGGAAGGTGTGAATTTCACTGCACTTAGGGAAATTAAACTGCTTAAAGAGCTCAAGGACCCGAATATAATTGAGTTGATCGATGCGTTCCCTCACAAAGGTAACTTGCATCTTGTGTTCGAGTTCATGGAAAGCGACCTCGAAGCTGTCATTCGAGATAGAAACATTGTTCTTTCTCCTGCTGACATAAAATCGTACCTTCAAATGACATTGAAAGGGCTCGCATATTGCCATAAGAAATGGGTATTACACAGGGATATGAAGCCAAACAACTTGCTGATAGGAGCTGATGGACAGCTTAAGCTAGCAGACTTTGGTTTAGCACGTATATTTGGAAGCCCAGATCGCAAATTCACTCATCAGGTTTTTGCTCGATGGTATAGAGCACCTGAACTGTTGTTTGGTACCAAGCAATATGGATCTGGGGTGGATGTTTGGGCTGCAGCTTGTATATTTGCTGAACTTCTCCTCCGTCGACCTTTCCTACAGGGTTCAAGTGACATTGATCAACTAGGAAAGATCTTTGCAGCTTTTGGGACTCCAAAGCCTTCTCAATGGTCTGACATGGTTTACCTTCCTGATTATGTGGAATACCAGTTTGTTCCTGCACCTCCACTGCGTTCATTGTTTCCGATGGCGAGTGATGATACATTAGATCTGTTATCAAAGATGTTCACCTATGATCCAAAAGCACGGATTTCTGTGCAGCAGGCATTGGAGCACAGGTATTTTTCATCCGTACCTGCACCAACAAAACCAGCACTACTTCCGAGGCCTTCCCCAAAGGGGGACTCTCTTAATTCTAGGCCTTCGGATTTTAATCCACAGGAGGGCCCTATTGTGTTGTCTCCTCCAAGAAAGTCAAGAAGAGTGATGCCACAACGTGAGGGGCTTGAAGGGAATGCTTACCAAGTTGATAAGGTTGATGATCATTCAAATGAAGTCAGACAAGCAGCTGGTGAGAATACAGGGAGGAGCGAAAATATACCAATGTCGATAGATATGTCTTTGTTTGGATCAAGACCTCCACCCAGACCTACTCTGAACAGTGCTGACAGATCACATCTGAAGAGGAAATTAGATCTTGAATTCCTACCTCCTGAGCCAGAATAA 1269 0.4437 MSEVDQFLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKHKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMESDLEAVIRDRNIVLSPADIKSYLQMTLKGLAYCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPSQWSDMVYLPDYVEYQFVPAPPLRSLFPMASDDTLDLLSKMFTYDPKARISVQQALEHRYFSSVPAPTKPALLPRPSPKGDSLNSRPSDFNPQEGPIVLSPPRKSRRVMPQREGLEGNAYQVDKVDDHSNEVRQAAGENTGRSENIPMSIDMSLFGSRPPPRPTLNSADRSHLKRKLDLEFLPPEPE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01190 422 ProSiteProfiles Protein kinase domain profile. 16 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01190 422 PANTHER CELL DIVISION PROTEIN KINASE 14 300 - -
Eupl11g01190 422 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Eupl11g01190 422 CDD STKc_CDK7 15 309 IPR037770 GO:0005675|GO:0008353|GO:0070985
Eupl11g01190 422 MobiDBLite consensus disorder prediction 302 422 - -
Eupl11g01190 422 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Eupl11g01190 422 MobiDBLite consensus disorder prediction 354 368 - -
Eupl11g01190 422 MobiDBLite consensus disorder prediction 403 422 - -
Eupl11g01190 422 SUPERFAMILY Protein kinase-like (PK-like) 11 302 IPR011009 -
Eupl11g01190 422 SMART serkin_6 16 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01190 422 Gene3D Transferase(Phosphotransferase) domain 1 97 312 - -
Eupl11g01190 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Eupl11g01190 422 FunFam Cyclin-dependent kinase D-1 7 96 - -
Eupl11g01190 422 Pfam Protein kinase domain 18 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01190 422 FunFam Putative cyclin-dependent kinase 7 97 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01190 Eupl-Chr11 16647126 16676020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01190 10 416 Core Cell Cycle Gene Families AT1G18040 74.939 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Eupl11g01190 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01190 K02202 - nnu:104613339 773.467