Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01138 ATGAGGAAACCTTGTTGTGAAAAGCAAGATACAAATAAAGGAGCTTGGTCGAAGCAAGAAGACCAAAAGCTAATTGATTACATCCGAGCCCATGGTGAAGGTTGCTGGCGTTCACTCCCTCAAGCTGCAGGATTGCTTCGCTGTGGTAAAAGTTGTAGGCTGAGATGGATAAATTATTTAAGGCCGGACCTTAAACGGGGGAACTTTGCTGAGGATGAGGAGGACCTCATCATCAAGCTCCATGCACTCTTAGGCAATCGGTGGTCATTGATAGCTGGGAGATTGCCAGGGCGTACAGACAACGAGGTGAAGAACTACTGGAATTCACATTTAAGGAGAAAGCTGATAAGCTTGGGTATTGATCCCAATAACCATCGCTTAAGCGACAACCTCCCTCGTCGTCCTCAACGTCAACGGGTCTCTAGTAGTTCTACATCGTATGGGTCGAAGAACCAGGCATGTCAACCATGTCAGCCTGTGAAATCCCATGGAGACAACGATCAGGTGTCCGACGCCGCCAGCTGCCTGGAGGATGATACAGGTGCCTTGCCTGATTTGAATCTTGATCTCACTATGACAATTCCTTCTCCTTCTCATACTCGCACAGAAGAGACGCAACATATAGAGTCGAATGCAGCTGGGGAATTCGAAAATGGGTCGTCTCCTACACTTATTCTCTTTAGATGA 687 0.4731 MRKPCCEKQDTNKGAWSKQEDQKLIDYIRAHGEGCWRSLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLISLGIDPNNHRLSDNLPRRPQRQRVSSSSTSYGSKNQACQPCQPVKSHGDNDQVSDAASCLEDDTGALPDLNLDLTMTIPSPSHTRTEETQHIESNAAGEFENGSSPTLILFR* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01138 228 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 187 - -
Eupl11g01138 228 MobiDBLite consensus disorder prediction 124 171 - -
Eupl11g01138 228 FunFam MYB-related transcription factor 12 65 - -
Eupl11g01138 228 CDD SANT 68 111 IPR001005 -
Eupl11g01138 228 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Eupl11g01138 228 CDD SANT 15 60 IPR001005 -
Eupl11g01138 228 MobiDBLite consensus disorder prediction 134 169 - -
Eupl11g01138 228 Gene3D - 13 65 - -
Eupl11g01138 228 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Eupl11g01138 228 SMART sant 65 113 IPR001005 -
Eupl11g01138 228 SMART sant 12 62 IPR001005 -
Eupl11g01138 228 Gene3D - 68 142 - -
Eupl11g01138 228 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Eupl11g01138 228 FunFam MYB transcription factor 67 128 - -
Eupl11g01138 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Eupl11g01138 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Eupl11g01138 228 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Eupl11g01138 228 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01138 Eupl-Chr11 15780837 15782501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01138 2 195 MYB Transcription Factor Family AT4G38620 56.585 3.14e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl11g01138 Myb_DNA-binding 5.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01138 K09422 - ming:122083541 372.859