Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01127 ATGGATTCTGACCAACGACCACTATCTTATTACACCGTCTTAGGCATCGACACAAATTCCTCGATTGCCGAAATACGAAGAGCTTACCGGAAGCTTGCGATGCAATGGCATCCGGACAGGAGGACGAGAACTCCATCACTGTTGGGAGAAGCTAAGCGAAAATTCCAGCAAATCCAGGAGGCCTATTCAGTTCTATCGGATCAGACGAAAAGAACAATGTACGATGCAGGTTTATATGATCCAAATGATGAAGAAGAAGAGGACAAGGGTTTCTACGATTTCGTTCAAGAAATGGTGTCGCTCATGGCCAGCGTTAAGAGGGAGGAGAAGAGCTACAGCATGGAAGAGCTCCAGCGGATGTTCATGGAAATGGCACAAGGATTCGATTCTCCTCAGTGGTTTTGCGGGTTTGGGAATGAAGGGACGTCGTATGGGTCCACGGTTCTAGAAGATTCCAGGAGCTGTAAGAGAGGTCGATGGCAATCGGATCAGACGATGGGGAGGGACTCGGGACTCCCATGTCCACCTGTCAGGTTTGGAGAGTTTGGTAGGACAGGGTTTTGCGGTTAA 570 0.4877 MDSDQRPLSYYTVLGIDTNSSIAEIRRAYRKLAMQWHPDRRTRTPSLLGEAKRKFQQIQEAYSVLSDQTKRTMYDAGLYDPNDEEEEDKGFYDFVQEMVSLMASVKREEKSYSMEELQRMFMEMAQGFDSPQWFCGFGNEGTSYGSTVLEDSRSCKRGRWQSDQTMGRDSGLPCPPVRFGEFGRTGFCG* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01127 189 PRINTS DnaJ domain signature 11 29 IPR001623 -
Eupl11g01127 189 PRINTS DnaJ domain signature 50 70 IPR001623 -
Eupl11g01127 189 PRINTS DnaJ domain signature 29 44 IPR001623 -
Eupl11g01127 189 Gene3D DnaJ domain 8 131 IPR036869 -
Eupl11g01127 189 ProSiteProfiles dnaJ domain profile. 9 78 IPR001623 -
Eupl11g01127 189 SMART dnaj_3 8 70 IPR001623 -
Eupl11g01127 189 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Eupl11g01127 189 CDD DnaJ 10 67 IPR001623 -
Eupl11g01127 189 Pfam DnaJ domain 10 75 IPR001623 -
Eupl11g01127 189 PANTHER PUTATIVE, EXPRESSED-RELATED 3 132 - -
Eupl11g01127 189 SUPERFAMILY Chaperone J-domain 8 83 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01127 Eupl-Chr11 15575529 15577885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01127 10 76 C2H2 Transcription Factor Family AT1G74250 47.059 2.83e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01127 - - cave:132179194 224.172