Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01126 ATGATTTCAGCAACAGAAAGCATCAGCCCAGGTTGGGATCCTCATCCTCATAACCATCATCAACATTATCATTGTCAACCTCACCACCCTCAAGAGAATCCTCAACTGAAGCTAGCCTTAGATGGAAACAACCCCAGAAAAATTCCGGACAAGATAGATGAAGAGATGGGTGGACAAGAAGTAGTCAAGATCGAGAGAAGGAAGAGACCCACAACAAAAGATCAAGATCAAGATCAGGTGGTGGTGGTCTCAAGGGTCTGTGTTGATTGCAGAACCTCAAAGACCCCTTTATGGAGAAGTGGTCCTGCTGGTCCTAAGTCCCTCTGTAATGCATGTGGGATCAGATTCAGGAAGAGAAGGAGAAGAGAGTTTGATTTTCTTGAAATGAGAAGTAATGTCTCCATGAAAGAGAAGAACCAGAGAGATGAGGAGGAAGATAAGAGGGTTGTGCTGGTCTTAGAGAGGAAATTTGAAGGAAGAGAAGAAGCGGAGGCAGCACTTCTATTGATGGCTTTGTCTTGTGGGCTATGTGTTCATTGA 540 0.4444 MISATESISPGWDPHPHNHHQHYHCQPHHPQENPQLKLALDGNNPRKIPDKIDEEMGGQEVVKIERRKRPTTKDQDQDQVVVVSRVCVDCRTSKTPLWRSGPAGPKSLCNACGIRFRKRRRREFDFLEMRSNVSMKEKNQRDEEEDKRVVLVLERKFEGREEAEAALLLMALSCGLCVH* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01126 179 Gene3D - 83 149 IPR013088 GO:0006355|GO:0008270
Eupl11g01126 179 MobiDBLite consensus disorder prediction 1 38 - -
Eupl11g01126 179 ProSiteProfiles GATA-type zinc finger domain profile. 81 117 IPR000679 GO:0006355|GO:0043565
Eupl11g01126 179 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 84 122 - -
Eupl11g01126 179 ProSitePatterns GATA-type zinc finger domain. 87 112 IPR000679 GO:0006355|GO:0043565
Eupl11g01126 179 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 71 124 - -
Eupl11g01126 179 SMART GATA_3 81 139 IPR000679 GO:0006355|GO:0043565
Eupl11g01126 179 Pfam GATA zinc finger 87 121 IPR000679 GO:0006355|GO:0043565
Eupl11g01126 179 CDD ZnF_GATA 90 114 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01126 Eupl-Chr11 15565627 15566513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01126 74 175 C2C2-Gata Transcription Factor Family AT5G49300 43.750 4.84e-20 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Eupl11g01126 GATA 2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01126 - - msin:131235379 166.777