Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01122 ATGGAGTCAGAGCGTCAGTTTTCCGGCACCGATTCCAGCTTAAGCACCGTCAGAACTCCGGCAATCGTACAGCAGACTATAGAACTCATCCAATCCGACGACTCATATTCCAAAATTCAGGCTGCCAGGGAAATTCGACGGCTCACGAAGACGTCTCAGAAGCACCGCCGTCATTTTTCCGGAGCAATCGAACCCCTCGTTTCGATGCTCAGATCTGACTCCCTCGAATACAACGAATCTTCTCTTCTCGCCCTCCTCAATCTCGCTGTCAAAGATGAAAAGAATAAGATCAAGATAGTAGATGCCGGTGCCCTCGAACCACTCATCAGTTTTCTTTGGTCTGACAGTTCAAATTTGCGGGAGTATGCCACTGCAGCTTTGCTTACCCTCTCTGCTTCTTCTGTCAACAAGCCAACCATAAGTGCCTCTGGTGCCATCCCTCTCCTTGTCGAAATCCTTAGAGACGGAAGCCCGCAAGCCAAGATTGATGCACTGATGGCACTTTACAATCTCTCCACTCACACAGAAAACCTCACCATCATTCTTGCAGCGAAAGCTATCCGTCCCTTAGTTAACTTGCTCAAGAGCTGCAAAAAATCTTCAAAAACAGCTGAGAAGTGCAGTGCTCTCTTAGAATCCTTATTGGGTTTTGATGAGGGGAGGACTGCATTGACAGCTGAAGAAGGTGGAGTGCTTGCAGTGGTCGAAGTGCTTGAGAACGGATCACTCCAAAGCCGAGAACATGCAGTTGGTGCGCTTCTGGCAATGTGTGAGAGCGACCGGTCTAGATACAGGGAACCGATTCTCAAGGAAGGTGCCATCCCTGGTCTTCTCGAGCTCACTGTCCAGGGAACACCTAAATCTCAGTCGAAAGCACATACCCTCTTGCGGTTACTGAGAAACTCTCCTTACCCAAGATCCGAGCTTCAGGCGGACACGCTAGAGAACATTGTCTGCAACATTGTCTCTCAGATTGATGGTGATGATCGAGGCGGAAAAGCAAAAAAGATGCTAGCTGACATGGTGCAAGTTAGCATGGAGCAGAGCTTGAGACATTTACAGCAGAGGGCGTTGGTGTGCACCACCCCAACTGATCTACCTCTGACTAGCTGTACCTCTGAAGTTTCTTTGAAATGA 1137 0.489 MESERQFSGTDSSLSTVRTPAIVQQTIELIQSDDSYSKIQAAREIRRLTKTSQKHRRHFSGAIEPLVSMLRSDSLEYNESSLLALLNLAVKDEKNKIKIVDAGALEPLISFLWSDSSNLREYATAALLTLSASSVNKPTISASGAIPLLVEILRDGSPQAKIDALMALYNLSTHTENLTIILAAKAIRPLVNLLKSCKKSSKTAEKCSALLESLLGFDEGRTALTAEEGGVLAVVEVLENGSLQSREHAVGALLAMCESDRSRYREPILKEGAIPGLLELTVQGTPKSQSKAHTLLRLLRNSPYPRSELQADTLENIVCNIVSQIDGDDRGGKAKKMLADMVQVSMEQSLRHLQQRALVCTTPTDLPLTSCTSEVSLK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01122 378 Gene3D - 220 331 IPR011989 -
Eupl11g01122 378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 61 103 IPR000225 GO:0005515
Eupl11g01122 378 PANTHER U BOX DOMAIN-CONTAINING 25 305 - -
Eupl11g01122 378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Eupl11g01122 378 FunFam U-box domain-containing protein 4 8 359 - -
Eupl11g01122 378 Gene3D - 21 219 IPR011989 -
Eupl11g01122 378 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Eupl11g01122 378 SMART arm_5 133 173 IPR000225 GO:0005515
Eupl11g01122 378 SMART arm_5 92 132 IPR000225 GO:0005515
Eupl11g01122 378 SMART arm_5 174 216 IPR000225 GO:0005515
Eupl11g01122 378 SMART arm_5 217 258 IPR000225 GO:0005515
Eupl11g01122 378 SMART arm_5 50 90 IPR000225 GO:0005515
Eupl11g01122 378 SUPERFAMILY ARM repeat 20 326 IPR016024 -
Eupl11g01122 378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 144 186 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01122 Eupl-Chr11 15394767 15399701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01122 23 301 U-box Gene Family AT2G23140 39.502 4.49e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01122 - - nnu:104609920 561.222