Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01121 ATGGCACTTGCAAAGGAGAGGACCACCCAGGACTCACATATGGGCTTGATTCAAGCTTGTTCCTTCTATGGAAATCTGTACGGCGGAACATCAGTTCAAGTACCGGATCCTTCTTCGGTTGGATTGTTCGGCTTCGAGAACTATCACAAGACAGTTCTTGAAGAGGGAGAGGGATCGGACAAGGTATGTGAGGCTCTCAAGAACTTCGCGGTGAGCCGTCTTCCTTCTCTTTCTGATCCAAGCAATGTGAATGGTATCATGTTTGGAAACACTGATTCTCCACCAGAAGATGCTCAATCTGTCATTAACTTCAAGACTGGGTTTGATCATTGGGTGCATTCTAGTGGATCTTTGCTTAGCTTCGACCAAGCGGAGCGCGTTTCTCAAACCCGATGCCTGAAGATCCATCATGAAGATGAAAACCCAATTTGGGAAGATGTCATGGACCACAATTACCAGTGGGAACAACAACTTAATCAAAATTGTGGTACTGATCACTCTCGCCTGTCCGAGGATCTGGATTGTTTCGAAACGGCGAGCAGTTATGGTTCGATGGACAACACTGCCAAGGATAACCAACTTGGGGAGGAGAGGTATGGGTGGTTGTACTCATCAGGAGGTGTTGCTGCTGAGATCCATCAAGAGTCCAGAGGTCCAGAAGCAAACTTCCATAAGCGTCCCCACATGGGTGGCGAAACGCAATTTCCCAAGAAGCATTGTACTACTGGTGCCCCTAGGAAGCCTAAACCCAAGTCAATTCCATCCAAGGACCCGCAAAGTATCGCGGCAAAGAACCGACGAGAACGGATCAGTGAGCGGCTTAAGATATTACAGGATCTCGTACCCAACGGCGCAAAGGTTGATCTGGTTACCATGTTGGAGAAAGCTATCAGCTATGTCAAGTTTCTTCAATTGCAAGTAAAGGTGTTGGCGACCGACGAGTTCTGGCCGGCGCAAGGCGGAAAAGCTCCGGAGGTTGCTCAAGTGAAGGAAGCCATTGATGCCATCCTCTCTTCTCACAGAGATAGAAATTCAAGCTCAAAGTGA 1047 0.4814 MALAKERTTQDSHMGLIQACSFYGNLYGGTSVQVPDPSSVGLFGFENYHKTVLEEGEGSDKVCEALKNFAVSRLPSLSDPSNVNGIMFGNTDSPPEDAQSVINFKTGFDHWVHSSGSLLSFDQAERVSQTRCLKIHHEDENPIWEDVMDHNYQWEQQLNQNCGTDHSRLSEDLDCFETASSYGSMDNTAKDNQLGEERYGWLYSSGGVAAEIHQESRGPEANFHKRPHMGGETQFPKKHCTTGAPRKPKPKSIPSKDPQSIAAKNRRERISERLKILQDLVPNGAKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEVAQVKEAIDAILSSHRDRNSSSK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01121 348 FunFam Transcription factor bHLH83 252 311 - -
Eupl11g01121 348 Gene3D - 251 311 IPR036638 GO:0046983
Eupl11g01121 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 314 IPR036638 GO:0046983
Eupl11g01121 348 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 110 312 IPR045843 GO:0003700|GO:0006355
Eupl11g01121 348 CDD bHLH_AtIND_like 255 317 - -
Eupl11g01121 348 SMART finulus 260 309 IPR011598 GO:0046983
Eupl11g01121 348 Pfam Helix-loop-helix DNA-binding domain 261 304 IPR011598 GO:0046983
Eupl11g01121 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 303 IPR011598 GO:0046983
Eupl11g01121 348 MobiDBLite consensus disorder prediction 217 233 - -
Eupl11g01121 348 MobiDBLite consensus disorder prediction 217 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01121 Eupl-Chr11 15370105 15371621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01121 78 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 45.620 2.82e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g01121 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01121 - - msin:131228078 402.134