Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01119 ATGGCGATCGTACCCACGAGCCCTTCTTGCTTGGATTTAACGATTTCCGTACCTGGGTTTGCTTCATCTCCGTCTCTTCCTTCGTCGGGGATGGAGGAAGAGTGGACGAAGGGAAGTGTAGAAGACGAAGAAGAGAGCGGTGGTGGCCCTCCTCGTAAGAAACTCCGCCTCACAAAAGAGCAGACTAAGTTGAAGCAGACGGAGATGGAATGCGAGTACTTGAAGAGGTGTTTTGGGTCGTTGACGGAGGAGAACAGGAGACTACAAAGGGAGGTGGAGGAGCTGAGGGCGTTGAGAGTGGGCCCGCCAACCGTGATCTCGCCGAACAGTTGTGAGCCCCTCCCAGCATCGACCCTGTCAATGTGTCCACGGTGTGAGCGCGTGACGAGTAGTGTCCGCGACAAGGGTCCCACCTCTACCAAATCCTTGTCGTTCTCAAAGCCTCCCGTCCTCCACTCGCGACAACCATCGGCTGCTTGTTAG 483 0.5569 MAIVPTSPSCLDLTISVPGFASSPSLPSSGMEEEWTKGSVEDEEESGGGPPRKKLRLTKEQTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRALRVGPPTVISPNSCEPLPASTLSMCPRCERVTSSVRDKGPTSTKSLSFSKPPVLHSRQPSAAC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01119 160 MobiDBLite consensus disorder prediction 132 151 - -
Eupl11g01119 160 Pfam Homeobox associated leucine zipper 65 98 IPR003106 GO:0006355|GO:0043565
Eupl11g01119 160 MobiDBLite consensus disorder prediction 14 54 - -
Eupl11g01119 160 MobiDBLite consensus disorder prediction 14 32 - -
Eupl11g01119 160 Coils Coil 78 98 - -
Eupl11g01119 160 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 62 144 - -
Eupl11g01119 160 SMART halz 65 108 IPR003106 GO:0006355|GO:0043565
Eupl11g01119 160 MobiDBLite consensus disorder prediction 129 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01119 Eupl-Chr11 15313566 15314641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01119 27 132 Homeobox Transcription Factor Family AT1G70920 40.132 7.20e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01119 K09338 - ming:122083488 207.994