Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01113 ATGGAGTCAACTCCCAACCTCCTCCTCCCCCTCCTCCTCTCCCTCCTCCACCTCTTTCCGGCCAATGCTACTCATCTCTTCCCTAAAGAAGCACTTCCAACAAAATCCGGTTACCTTCCGATCAATTCAACCTCCGGCTCCGCCATTTTCTTTGCTTTCTATGAAGCACAACAACCTGTTTCTCCTCTATCTCAAACACCCCTCCTCATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCCTAGTTGGCAACTTCTTTGAGCTTGGCCCGTGGCGTATAAACCCAGACTATGAAGAAGGCAAAAACCCAATTCTCAAACAGAATCCAGGTGCTTGGAATCATCTTTTCGGCTTAATTTTCCTTGATAACCCAATTGGGGCTGGCTTCAGTATCGCCTCCACACCTGACGAGATCCCAAAAGATCAAACTAAAGTTGCTAAGCACCTTTTTGTTGCCCTCCGGTCGTTTATCTCGTTACACCCATCGTTCAAATCTCGCCCAATTTATATCACCGGCGAAAGCTATGCTGGCAAGTACGTTCCGGCAATTGGGTATTACATATTGCAAAAGAATTCACAATTGCCGGCATCCCACCAGTTGAATTTAAGAGGAGTTGCAATTGGGAATGGGTTGACAGACCCTGCTACTCAGGTAGCTACTCTTGGGGTGACCGCGTATTTCTCTGGCCTGATCAATGAAAAACAGAGGACCCAACTTGAGGAAATTCAAGCCGAGGCGGTGAGATTGACGCGAGAAGGTAAATGGAGTGAGGCAACAGATGCGCATAGGAGGGTAGTGCACGGGTTGGAAAACATGACAGGGTTGGCTACTCTATACGATCTGAGAAGGAAGAAGCCTTATGAAACTGACATGGTCAGTGTTTTTCTACAGAAGGAAGAGGTAAAGAAGGCTTTGGGCGTGGAGAAATCAATCATCTGGGAGGAATGTAGCGACATTGTGGGGAATGCTTTGCATGAAGATGTGATGAAGAGTGTGAAGTTCATGGTGGAAGAACTGGTGAAGAAGAGTAAGGTGTTGCTGTACCAGGGGCAGTTTGATTTGAGAGATGGTGTGGTTTCGACTGAGGCTTGGATTAAGGAAATGAGTTGGGAGGGACTGGAGAGGTTCCTAATGGCAGAGAGGAAGGTGTGGGAAGTGAATGGAGAGCTTGCTGGGTATGTGCAGAAATGGGGGAGCTTGAGCGAAGTTGTTGTTTCAGGGGCTGGGCACCTTGTTCCTGCTGATCAGGCATTGAGTTCTCAGGCAATGATCGAAGATTGGGTTTTGGAGAGGGGATTGTTTGGTAGTGAGAAGGGGATTTGA 1323 0.4837 MESTPNLLLPLLLSLLHLFPANATHLFPKEALPTKSGYLPINSTSGSAIFFAFYEAQQPVSPLSQTPLLIWLQGGPGCSSLVGNFFELGPWRINPDYEEGKNPILKQNPGAWNHLFGLIFLDNPIGAGFSIASTPDEIPKDQTKVAKHLFVALRSFISLHPSFKSRPIYITGESYAGKYVPAIGYYILQKNSQLPASHQLNLRGVAIGNGLTDPATQVATLGVTAYFSGLINEKQRTQLEEIQAEAVRLTREGKWSEATDAHRRVVHGLENMTGLATLYDLRRKKPYETDMVSVFLQKEEVKKALGVEKSIIWEECSDIVGNALHEDVMKSVKFMVEELVKKSKVLLYQGQFDLRDGVVSTEAWIKEMSWEGLERFLMAERKVWEVNGELAGYVQKWGSLSEVVVSGAGHLVPADQALSSQAMIEDWVLERGLFGSEKGI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01113 440 Gene3D alpha/beta hydrolase 20 433 IPR029058 -
Eupl11g01113 440 ProSitePatterns Serine carboxypeptidases, histidine active site. 400 417 IPR033124 GO:0004185
Eupl11g01113 440 Coils Coil 232 252 - -
Eupl11g01113 440 Pfam Serine carboxypeptidase 32 428 IPR001563 GO:0004185|GO:0006508
Eupl11g01113 440 SUPERFAMILY alpha/beta-Hydrolases 33 428 IPR029058 -
Eupl11g01113 440 FunFam Carboxypeptidase 19 435 - -
Eupl11g01113 440 ProSitePatterns Serine carboxypeptidases, serine active site. 170 177 IPR018202 GO:0004185
Eupl11g01113 440 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 416 IPR001563 GO:0004185|GO:0006508
Eupl11g01113 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Eupl11g01113 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Eupl11g01113 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Eupl11g01113 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01113 Eupl-Chr11 15159615 15160940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01113 291 428 Calmodulin-binding Proteins AT2G22960 21.986 9.14e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01113 K09645 - msin:131245609 689.878