Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01105 ATGGACGACGAAGTAGTTCAGCGAGTATTCGAGGAAGGAGGCCGAGATTACTTCCAACAACCCTCCACCTCTTCTCCCTCTTCTTCTTCTTCCATCCTTCAATCGCTTCCTCTCCATGTGTCTTTCGATCATGGCTATTATTTACTAGTAAAAGCTATTCAAGAACTCCGAGGAAAAAAGGAGGGTCTTGTGACAGTCGGCATTGGTGGCCCTAGCGGCTCTGGTAAAACAAGTTTGGGGGAGAAGGTAGCATCTGTAATCGGTTGTACTGTTGTATCAATGGAGAACTATCGCGATGGAGTCGATGATGGGAACGACCTGGATTCAATAGATTTTGATACTTTAGTTCGAAATCTCGAGGATTTGATGAAGGGTAAAGATGCATTGATGCCGCTGTTTGATTTCCAAGAAAAGAGACGTGTTGGTTCAAAAACAATAAGGAGTTCTTCATCAGGGGTGGTAATTGTTGATGGTACTTATGCACTACACTCAAAATTGCGCTCTTTGCTAGACATTCGGGTTGCAGTGGTTGGTGGTGTTCATTTTAGCCTACTTTCCAAAGTAAGATATGACATTGGGGATTCTTGTTCCTTGGATTACCTCATTGACAGCATATTCCCGTTATTCAGAAAGCACATTGAGCCAGACCTCCATCATGCTCAGATTAGAATCAACAACAGCTTTGTTTCATCTTTTAGAGAGCCCATCTACAAGCTGAAATGCAAAAATGAGTCTCCAAACGGACATTCAGCTTTCTCTTTTCATGGAAATGAAGCACAAACAGATAATTTTATTGAGATGTACCTTAGACCACCATCTGCGCGTGAAGAAGCACGAATTAATGACTGGATAAAGGTGCGGCAGTCTGGTATAAGATATTATTTATCACTAGGTGACCAGAGGATTGTTGACAAGAATTACATAATCAGACCAAAAGCCGAATTTGAGGTGGGACGGATGACTCTAGGTGGGTTGCTGGCTTTGGGATACACTGTTGTCGTCAGTTACAAACGTGCATCTACATCAGTCAGTAACGGCAATCTGTCAATGTCACTTGAAACCATCGATACTCTTGGCGAGACATTCATGGTCTTGAGGGGTTCCGATAGGAAAGTAGTTGGAGCAGAAGCTTCTAGGATGGGTATCAAGGGACCATGGATCACTAAGTCATATCTAGAAATGATTCTCGAAAGCAGAGGTGTACCGCGTCTTAATACACCACCACCCTTGTCTAGTACATCTTTAACTGGGGGTCAAGCGAAGGTGATCATTGCTCCAAAGCCAATCCGTGTTCCTCAAAACCTTGTTAACAAGCTTGAGGATTTAGCTCAGCCATGGACTCGTTCTCCAACAAAGTCCAAAATGGAGCCTGTACTAGCAACATGGCGCTTCATCTCCTCAGATCCTCCCCATGTTGACAGTCCAGTTGTAGATTCTTCTGCTTTCAGGGATGCCATGCAGCTTGCTCCAATGCCTGATTCATATGACTTGGATAGGGGCTTGCTTCTTTCTGTTCAAGCAATTCAGGCGTTGTTGGAGAACAAGGGCCTCCCAGTTATCGTGGGCATTGGAGGTCCAAGTGGATCTGGCAAAACTAGTTTGGCTCATAAAATGGCAAATATTGTTGGCTGTGAAGTCATTTCACTTGAAAGCTATTATAAATCTGAACAAGTAAAGGACTTTAAGTATGATGACTTTAGCTCTCTTGATCTATCTTTGCTTTCCAAGAATATTGATGACATAAGGAACTGTCAAAGAACAAAAGTGCCTATATTTGACTTGGAGAATTGTACTCGGGGCGGGTTCAAGGAACTTCAAGTTTCTGAAGATTGTGGAGTGGTAATTTTTGAAGGGGTATATGCTTTGCATCCGGATATCCGAAAATCACTTGACTTGTGGATAGCTGTTGTTGGAGGTGTGCATTCACACCTGATTGCTAGAGTTCAAAGGGACAAGAACAGAGTTGGGTGTTTTATGTCCCAGAATGAAATTATGATGACAGTGTTTCCGATGTTTCAGCAACACATTGAACCCCATCTTGTTCATGCACATCTCAAAATTCGAAATGACTTTGATCCTGTGCTTTCTCCTGAGAGTTCACTGTTTGTTTTGAAAAGCAATAAGCAGGTGGCATATCAAGACATTTTGAAAATACTCGACCCTGCGAAATTCTGCAGTTCCGTTCAAAATTTTACTGATATATATTTAAGGCTTCCTGGAACACCTTCTAATGGGCAGCTGGCAGAAAGTGAGTGCATAAGAGTTAGATTATGTGAAGGCAGATTTGCATTATTGATACGAGAGCCTATCAGGGAAGGGAACTTAATCATACAACCAAAAGTGGATTTTGATATCAGCATTAGCACAGTTGCTGGCCTTCTTAACCTTGGGTATCAAGCTGTAGCATACATTGAAGCATCTGCATTAATCTACCAAGATGGAAAGATTCTTATTGAAATTGATCATCTACAAGATGCTCCAAGCCCGTACCTACAAATTAAAGGAACAAATAAAGAAGTAGTAGCTGCCGCTGGTTCGACACTCAGCCTAGATGGTTCATATACGACAAAGAGTTACCTTCAAATTATTCTGGAAAGTTTGCCAGCATTTGAAAGAAGCTCAACAGGAATTCACAGTCAGCAAGCTACAAGATTGCAGGAACTTGTGGAATTTATTCAATCTCAGGGCAGCAGTTTGGTTGCGGAATCCTTGCCCAGCAGAGGGGGTTTGCCAATGGAAGGAATAATTGAAGACATGCAGTCACGGATCAGAAGGCTCGAACGCTGGCATACTATCAATACCGTGCTATGGACATTTCTGATGTCTGCTCTTGTTGGTTATTCGCTCTACCAAAGGAAGCGCCAATGA 2868 0.425 MDDEVVQRVFEEGGRDYFQQPSTSSPSSSSSILQSLPLHVSFDHGYYLLVKAIQELRGKKEGLVTVGIGGPSGSGKTSLGEKVASVIGCTVVSMENYRDGVDDGNDLDSIDFDTLVRNLEDLMKGKDALMPLFDFQEKRRVGSKTIRSSSSGVVIVDGTYALHSKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREPIYKLKCKNESPNGHSAFSFHGNEAQTDNFIEMYLRPPSAREEARINDWIKVRQSGIRYYLSLGDQRIVDKNYIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTSVSNGNLSMSLETIDTLGETFMVLRGSDRKVVGAEASRMGIKGPWITKSYLEMILESRGVPRLNTPPPLSSTSLTGGQAKVIIAPKPIRVPQNLVNKLEDLAQPWTRSPTKSKMEPVLATWRFISSDPPHVDSPVVDSSAFRDAMQLAPMPDSYDLDRGLLLSVQAIQALLENKGLPVIVGIGGPSGSGKTSLAHKMANIVGCEVISLESYYKSEQVKDFKYDDFSSLDLSLLSKNIDDIRNCQRTKVPIFDLENCTRGGFKELQVSEDCGVVIFEGVYALHPDIRKSLDLWIAVVGGVHSHLIARVQRDKNRVGCFMSQNEIMMTVFPMFQQHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKQVAYQDILKILDPAKFCSSVQNFTDIYLRLPGTPSNGQLAESECIRVRLCEGRFALLIREPIREGNLIIQPKVDFDISISTVAGLLNLGYQAVAYIEASALIYQDGKILIEIDHLQDAPSPYLQIKGTNKEVVAAAGSTLSLDGSYTTKSYLQIILESLPAFERSSTGIHSQQATRLQELVEFIQSQGSSLVAESLPSRGGLPMEGIIEDMQSRIRRLERWHTINTVLWTFLMSALVGYSLYQRKRQ* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01105 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 177 IPR027417 -
Eupl11g01105 955 SUPERFAMILY CYTH-like phosphatases 721 862 IPR033469 -
Eupl11g01105 955 Pfam Phosphoribulokinase / Uridine kinase family 520 687 IPR006083 GO:0005524|GO:0016301
Eupl11g01105 955 Pfam Phosphoribulokinase / Uridine kinase family 66 224 IPR006083 GO:0005524|GO:0016301
Eupl11g01105 955 SMART AAA_5 62 212 IPR003593 GO:0016887
Eupl11g01105 955 SMART AAA_5 517 670 IPR003593 GO:0016887
Eupl11g01105 955 PANTHER URIDINE KINASE 699 895 - -
Eupl11g01105 955 CDD UMPK_like 65 227 - -
Eupl11g01105 955 PRINTS Uridine kinase signature 545 556 - -
Eupl11g01105 955 PRINTS Uridine kinase signature 518 535 - -
Eupl11g01105 955 PRINTS Uridine kinase signature 641 651 - -
Eupl11g01105 955 Gene3D - 64 242 IPR027417 -
Eupl11g01105 955 Gene3D - 517 707 IPR027417 -
Eupl11g01105 955 CDD UMPK_like 520 690 - -
Eupl11g01105 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 690 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01105 Eupl-Chr11 14987144 15049386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01105 513 678 PRT Gene Family AT1G55810 22.159 1.19e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01105 - - nnu:104609946 1667.13