Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01096 ATGGGTAGCTCCCAACGTAGTTGTTGCATTGACTATGAAGAAGCTCTGAAAGACCAAAATGGTGCTAAAAACCAAGTTATTTGTTCTTCCTTAATAACTGCAGATGACTGTAATGAAATAGACTCAGAAGTTAAAACTCTACTGCAAAAGATGGTTTGGGAAATGGGGTTGGGTTGTATTCTCCCAAGAAAGGTTCATCAACGACGACGAAGCGATAAGAAACAGGATCAAGAGAATAATGAAGAAGCTTCAGAGCATAACAAGGCTTGGTTGCTAGCTGAGTCAGGAGATGCTGGTGTTGGTGTCGGTGTTGGTCCTGGTGCTGAATTCAACGCTCCTGATCTGCAATCGGTCCACTCGTCTTTTCGGTTCAGTTTTGGTTCACAAGTTGAGCTTGATTCGCTGAGCTTGAACTCCTCTTCTTCTGTGGCTACTGTTCTCATGGTGAATTTAGACACTGGTTTGCGAGAGCCTCAATCTCGGGACTTGAAATGGCGGAGGATTGAATCATTGGAGAGGAGTATTTCTCCAGTGGCTGAGACATTAGTCAGATTCAATTACGCTGAGATCCGCTCGGCGACAAGGAATTTCTGCAAAGACCGAGTACTGGGAAGAGGAGCACTGAGCTGTGTTTTCAGAGGGAGAGTTGGGTTTCGAAGAACTGCAGTTGCGATTAAGCGGTTAGACAAGGAAGATAAGGAATCTGCGAAGGCGTTTTGCCGAGAATTGTTGATTGCAAGCTCTCTCCATAATCGAAATATTGTTCCACTTGTGGGGTTTTGTATTGATCCAGAGGAGGGCCTGTTCTTGGTCTACAAGTATGTTTCGGGAGGAAGCTTAGAGCATCATCTCCATGAGAAGAAGAGAGGAGTAAAGGGTTGCTCTTCTCTTCCATGGTCTGTGAGATTTAAGGTTGCGATCGGAGTTGCAGAGGCGGTGGCGTACCTCCATAACGGAACAGAGAGATGTGCTGTTCATAGAGACATTAAACCCTCTAACATTCTCCTTTCTTCCAAGAAAACACCCAAGCTTTGTGATTTTGGACTAGCTACATGGACTCCTGCACCTTCAGTCCCTTTCCTTTGTAAAACTGTGAAAGGAACATTTGGGTATTTGGCTCCTGAATATTTTCAACATGGGAAAGTGTCTGATAAAACAGATGTGTATGCATTTGGGGTGGTCTTGTTGGAGCTAATAACTGGCCGGAAGCCGATTGAGGCCAAAAGAGCGCCAGGAGATGAGAACTTGGTCTTATGGGCAAAGCCACTCTTGCAACAAGGAGGAGGAGCCATTGAGGAGTTGCTTGATCCACAACTCAAACTTGGTCCACACAATTCAAGACAAATTAACCGGATGGTTCAAGCTGCAGCTGCCTGCATTAACAGCGAAGAATCCAGGAGACCAAGCATCTATCAAGTCATCGCAATATTGCGAGGTGAAGAGCATTATTGCTCGAACAGGAACAAGTCTGCCTTTTCAGGGAATGGCGGGTGCATTCTTGATTGTTATCCTCAGTTACAAGATGTACAGACGAAAAGTGACATGAGGAGTCACTTAGCTCTAGCCATGCTAGGGGTTTCGGATCTCGAGGACGACGAACACCTATATTGTCGTTGA 1617 0.4539 MGSSQRSCCIDYEEALKDQNGAKNQVICSSLITADDCNEIDSEVKTLLQKMVWEMGLGCILPRKVHQRRRSDKKQDQENNEEASEHNKAWLLAESGDAGVGVGVGPGAEFNAPDLQSVHSSFRFSFGSQVELDSLSLNSSSSVATVLMVNLDTGLREPQSRDLKWRRIESLERSISPVAETLVRFNYAEIRSATRNFCKDRVLGRGALSCVFRGRVGFRRTAVAIKRLDKEDKESAKAFCRELLIASSLHNRNIVPLVGFCIDPEEGLFLVYKYVSGGSLEHHLHEKKRGVKGCSSLPWSVRFKVAIGVAEAVAYLHNGTERCAVHRDIKPSNILLSSKKTPKLCDFGLATWTPAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRAPGDENLVLWAKPLLQQGGGAIEELLDPQLKLGPHNSRQINRMVQAAAACINSEESRRPSIYQVIAILRGEEHYCSNRNKSAFSGNGGCILDCYPQLQDVQTKSDMRSHLALAMLGVSDLEDDEHLYCR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01096 538 Gene3D Phosphorylase Kinase; domain 1 169 274 - -
Eupl11g01096 538 FunFam Putative receptor-like serine/threonine-protein kinase 275 492 - -
Eupl11g01096 538 PANTHER OS08G0249100 PROTEIN 56 490 IPR046958 -
Eupl11g01096 538 SMART serkin_6 197 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01096 538 FunFam probable serine/threonine-protein kinase PBL7 158 274 - -
Eupl11g01096 538 Pfam Protein kinase domain 199 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01096 538 Gene3D Transferase(Phosphotransferase) domain 1 275 494 - -
Eupl11g01096 538 SUPERFAMILY Protein kinase-like (PK-like) 178 477 IPR011009 -
Eupl11g01096 538 ProSiteProfiles Protein kinase domain profile. 197 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01096 Eupl-Chr11 14737325 14741015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01096 183 489 Trihelix Transcription Factor Family AT1G70460 41.479 1.03e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl11g01096 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01096 - - nnu:104609956 804.283