LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g01096	ATGGGTAGCTCCCAACGTAGTTGTTGCATTGACTATGAAGAAGCTCTGAAAGACCAAAATGGTGCTAAAAACCAAGTTATTTGTTCTTCCTTAATAACTGCAGATGACTGTAATGAAATAGACTCAGAAGTTAAAACTCTACTGCAAAAGATGGTTTGGGAAATGGGGTTGGGTTGTATTCTCCCAAGAAAGGTTCATCAACGACGACGAAGCGATAAGAAACAGGATCAAGAGAATAATGAAGAAGCTTCAGAGCATAACAAGGCTTGGTTGCTAGCTGAGTCAGGAGATGCTGGTGTTGGTGTCGGTGTTGGTCCTGGTGCTGAATTCAACGCTCCTGATCTGCAATCGGTCCACTCGTCTTTTCGGTTCAGTTTTGGTTCACAAGTTGAGCTTGATTCGCTGAGCTTGAACTCCTCTTCTTCTGTGGCTACTGTTCTCATGGTGAATTTAGACACTGGTTTGCGAGAGCCTCAATCTCGGGACTTGAAATGGCGGAGGATTGAATCATTGGAGAGGAGTATTTCTCCAGTGGCTGAGACATTAGTCAGATTCAATTACGCTGAGATCCGCTCGGCGACAAGGAATTTCTGCAAAGACCGAGTACTGGGAAGAGGAGCACTGAGCTGTGTTTTCAGAGGGAGAGTTGGGTTTCGAAGAACTGCAGTTGCGATTAAGCGGTTAGACAAGGAAGATAAGGAATCTGCGAAGGCGTTTTGCCGAGAATTGTTGATTGCAAGCTCTCTCCATAATCGAAATATTGTTCCACTTGTGGGGTTTTGTATTGATCCAGAGGAGGGCCTGTTCTTGGTCTACAAGTATGTTTCGGGAGGAAGCTTAGAGCATCATCTCCATGAGAAGAAGAGAGGAGTAAAGGGTTGCTCTTCTCTTCCATGGTCTGTGAGATTTAAGGTTGCGATCGGAGTTGCAGAGGCGGTGGCGTACCTCCATAACGGAACAGAGAGATGTGCTGTTCATAGAGACATTAAACCCTCTAACATTCTCCTTTCTTCCAAGAAAACACCCAAGCTTTGTGATTTTGGACTAGCTACATGGACTCCTGCACCTTCAGTCCCTTTCCTTTGTAAAACTGTGAAAGGAACATTTGGGTATTTGGCTCCTGAATATTTTCAACATGGGAAAGTGTCTGATAAAACAGATGTGTATGCATTTGGGGTGGTCTTGTTGGAGCTAATAACTGGCCGGAAGCCGATTGAGGCCAAAAGAGCGCCAGGAGATGAGAACTTGGTCTTATGGGCAAAGCCACTCTTGCAACAAGGAGGAGGAGCCATTGAGGAGTTGCTTGATCCACAACTCAAACTTGGTCCACACAATTCAAGACAAATTAACCGGATGGTTCAAGCTGCAGCTGCCTGCATTAACAGCGAAGAATCCAGGAGACCAAGCATCTATCAAGTCATCGCAATATTGCGAGGTGAAGAGCATTATTGCTCGAACAGGAACAAGTCTGCCTTTTCAGGGAATGGCGGGTGCATTCTTGATTGTTATCCTCAGTTACAAGATGTACAGACGAAAAGTGACATGAGGAGTCACTTAGCTCTAGCCATGCTAGGGGTTTCGGATCTCGAGGACGACGAACACCTATATTGTCGTTGA	1617	0.4539	MGSSQRSCCIDYEEALKDQNGAKNQVICSSLITADDCNEIDSEVKTLLQKMVWEMGLGCILPRKVHQRRRSDKKQDQENNEEASEHNKAWLLAESGDAGVGVGVGPGAEFNAPDLQSVHSSFRFSFGSQVELDSLSLNSSSSVATVLMVNLDTGLREPQSRDLKWRRIESLERSISPVAETLVRFNYAEIRSATRNFCKDRVLGRGALSCVFRGRVGFRRTAVAIKRLDKEDKESAKAFCRELLIASSLHNRNIVPLVGFCIDPEEGLFLVYKYVSGGSLEHHLHEKKRGVKGCSSLPWSVRFKVAIGVAEAVAYLHNGTERCAVHRDIKPSNILLSSKKTPKLCDFGLATWTPAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRAPGDENLVLWAKPLLQQGGGAIEELLDPQLKLGPHNSRQINRMVQAAAACINSEESRRPSIYQVIAILRGEEHYCSNRNKSAFSGNGGCILDCYPQLQDVQTKSDMRSHLALAMLGVSDLEDDEHLYCR*	539

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Eupl11g01096	538	Gene3D	Phosphorylase Kinase; domain 1	169	274	-	-
Eupl11g01096	538	FunFam	Putative receptor-like serine/threonine-protein kinase	275	492	-	-
Eupl11g01096	538	PANTHER	OS08G0249100 PROTEIN	56	490	IPR046958	-
Eupl11g01096	538	SMART	serkin_6	197	476	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Eupl11g01096	538	FunFam	probable serine/threonine-protein kinase PBL7	158	274	-	-
Eupl11g01096	538	Pfam	Protein kinase domain	199	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Eupl11g01096	538	Gene3D	Transferase(Phosphotransferase) domain 1	275	494	-	-
Eupl11g01096	538	SUPERFAMILY	Protein kinase-like (PK-like)	178	477	IPR011009	-
Eupl11g01096	538	ProSiteProfiles	Protein kinase domain profile.	197	483	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g01096	Eupl-Chr11	14737325	14741015	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g01096	183	489	Trihelix Transcription Factor Family	AT1G70460	41.479	1.03e-67	230

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Eupl11g01096		Pkinase	5.6e-43	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g01096	-		-	nnu:104609956	804.283

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