Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01048 ATGGTGTCGTTGAAGCTGCAGAAGCGGCTCGCCGCTAGCGTTCTCAAGTGTGGGAAGGGGAAGGTCTGGCTGGACCCCAATGAGAGCAGTGAGCTCTCCATGGCCAATTCCAGGCAGAACATAAGGAAACTGGTGAAAGATGGTTTTATCATCAAGAAGGCAACAAGGATACATTCGCGATCACGGGCTCGGACGGCTCAGGAGGCAAAGAGGAAAGGGAGGCACATGGGATATGGGAAGCGTAGTGGGACTAGGGAGGCGAGGCTGCCGACAAAGGTGCTGTGGATGAGGAGGATGAGAGTGCTGCGGCGCCTGCTGTGTAAATACCGGGAATTCAAGAAGATCGACCGGCACATGTACCATGACATGTACATGAAGGTGAAGGGAAATGTCTTCAAGAACAAGCGTGTGCTTATGGAGAGCATCCACAAGTCCAAGGCTGAGAAAGCGAGAGAGAAGACATTGTCTGACCAGTTCGAGGCCAAGAGAGCCAAGAGCAAAGCTAGCAGGGAGAGGAAAATGGCACGCGATTGGCCCAGGGGCCTGGAGAGCAGCCACTTCCACCAACACAGCCCATAG 579 0.5406 MVSLKLQKRLAASVLKCGKGKVWLDPNESSELSMANSRQNIRKLVKDGFIIKKATRIHSRSRARTAQEAKRKGRHMGYGKRSGTREARLPTKVLWMRRMRVLRRLLCKYREFKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKMARDWPRGLESSHFHQHSP* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01048 192 MobiDBLite consensus disorder prediction 60 83 - -
Eupl11g01048 192 Gene3D - 57 184 - -
Eupl11g01048 192 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Eupl11g01048 192 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Eupl11g01048 192 PANTHER 60S RIBOSOMAL PROTEIN L19 1 177 IPR039547 GO:0003723|GO:0003735|GO:0022625
Eupl11g01048 192 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Eupl11g01048 192 MobiDBLite consensus disorder prediction 144 192 - -
Eupl11g01048 192 FunFam Ribosomal protein L19 57 186 - -
Eupl11g01048 192 FunFam Ribosomal protein L19 1 56 - -
Eupl11g01048 192 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Eupl11g01048 192 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Eupl11g01048 192 MobiDBLite consensus disorder prediction 61 83 - -
Eupl11g01048 192 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01048 Eupl-Chr11 14059410 14062588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01048 1 176 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 87.500 3.26e-111 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01048 K02885 - msin:131230896 298.13