Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01045 ATGGATCCGATGAACAGCTCCCACATAAAGCTACTTGCCTTCAATTTTCTCTCCCTCACCCAGAAGTCATCTTCTTCTTATTCGGATCCAATTTCCTTCTATCGAAAGGGCAGAGCAGTCTCAAGAGCCGAAACCCTTGGCGTGGTGGTGAGCCGAGAGCGAAAGGGGGACAAATTCCTCAAATTCCTCGTTGACGACGGCACCGGATGCATTCCCTGCATCCTTTGGTTGAACCACCTTGATTCACCTTACTTCTCCAGGAGAAACCCTTGTGATGTTCGACTCATGGCGGAGATGGCGAAAGATCAGGCATCGGAAATCCAATTGGGTGTCCTCACTAGAATACGTGGTCGAATCACAAGTTACAGAGGTACGTTGCAGATCACAGTATCAGATATTGTGGTGGAGAGAGATCCGAATGCAGAGATCTTGCATTGGTTGGATTGCGTTAAGTTAGCTAGGAATTGCTACAATGTTAGATTTCCTCCTACAATTTTGCTGAAAAAACAAAATCAATTCAGATAG 525 0.459 MDPMNSSHIKLLAFNFLSLTQKSSSSYSDPISFYRKGRAVSRAETLGVVVSRERKGDKFLKFLVDDGTGCIPCILWLNHLDSPYFSRRNPCDVRLMAEMAKDQASEIQLGVLTRIRGRITSYRGTLQITVSDIVVERDPNAEILHWLDCVKLARNCYNVRFPPTILLKKQNQFR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01045 174 Gene3D - 1 162 IPR012340 -
Eupl11g01045 174 FunFam CST complex subunit STN1 2 160 - -
Eupl11g01045 174 SUPERFAMILY Nucleic acid-binding proteins 30 151 IPR012340 -
Eupl11g01045 174 Pfam OB-fold nucleic acid binding domain 47 134 IPR004365 GO:0003676
Eupl11g01045 174 PANTHER REPLICATION PROTEIN A-RELATED 8 158 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01045 Eupl-Chr11 13935643 13939638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01045 17 161 Core DNA Replication Machinery Family AT3G02920 23.448 4.05e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01045 K23312 - nnu:104593858 245.743