Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01043 ATGGATAAGCTTGTATTAGCTATTGTGAGGGTTTATCTTCTGGTTTCAGTTCTTAGGGTGGTGAATAGTGGCATGATATCATCATGTAGCCAAACCCCATATCCTGAAATATGCAATTCATTTGTTAGTACTACTAATCCTCTAGTCACCCTAGATGAAACCCAATTCGCATTCCGCGATGTAGCCCTTCGAGTCACCATGGACCAAGCCGAACAAGCCCACGGACTTGTTTCGGCCATCGACTTAAGCTCGTTCGATGATCGAGCTAAGGTAGCATGGGCTGATTGCTTAGAGCTTTTTGAGGATACCATTAGCCAGCTTAACCGCTCGATAAAGTCTACGAATCCGACGAGCATGAAAGAAGCTCAAACATGGCTAAGTGCAGCCATCACCAACCATCAAACATGCCAAAATGGGTTCATTGAGCTGAACTCATCTTCTCATTTAGCCTCCTTTAATCCCTTTGTGCTGAATAGCTTTCCAAAGTTACTTAGCAACTCACTTGCTATTAATCAAGCAGCTCTGTTTAATAAACCGGGCGATCGCCGACGCTTGCTATCAGACGGGTTCCCGACATGGGTTTCCGCCGCTGATAGGAAGCTTCTTCAGTCGACTAGCAAAGCCTCAGAAGCTGATCTTGTGGTGGCGCAAGATGGGTCTGGTAAGTACAAGACCATCTCTGAAGCTGTGGCTGCTTCAGTGAAGCTGAGGAGTGGGAGTAAGAGATTTGTTATACACGTGAAAGCTGGTGTTTACAAAGAGAACGTCGAGATAAAGAGATCAATGAAGAACATAATGTTCATTGGAGATGGGATTGATGCTACCATCGTTACGAGCAATAAGAACGTTCAAGATGGTTCCACGACTTATCGATCAGCGACTTTTGGGGTCTCTGGCGACGGCTTCATCGCTCGGGACATGACATTCGAAAACACGGCCGGACCGCAAAAGCACCAAGCAGTCGCGTTCCGATCAGGCTCGGATCTCTCAGTATTCTATAGTTGTAGCTTCAAGGGCTACCAAGACACCTTATATGTCTACTCCCAACGTCAATTCTATCGTAACTGCGATATCTATGGTACTATCGACTTCATTTTTGGTGATGCCGTCGCCATGATCCAGAATTGCAACATCTATGTGAGAAGACCCATGAACAACCAGTGGAACACCGTAACGGCTCAAGGACGGACAGACCCTAATGAGAATACAGGGATCTCGATCCATAATTCACGGGTTACGGCGGCTTCGGACTTGAGAGCAGTCCAGCATTCGTTCAAGACGTACCTTGGTCGACCATGGCAGAAGTACTCGAGGACGGTGTTCATGAAGACTTATCTCGATAGCTTGATCGATCCATCGGGGTGGCTCGAATGGAGTGGCAATTTTGCTCTAAGTACTTTGTACTATGGCGAATACATGAACACCGGTGGCGGTGCAGGCACTAGTGGTCGAGTAAAGTGGTCGGGATTTCATGTCATAACAAGTGCGGCCGAGGCCGGAAAGTTCACCGTTGGGAACTTCTTGAGCGGAAGTTCTTGGATTCCAGCCACCGGAGTCCCTTTCACTTTGGGTCTTTGA 1578 0.4734 MDKLVLAIVRVYLLVSVLRVVNSGMISSCSQTPYPEICNSFVSTTNPLVTLDETQFAFRDVALRVTMDQAEQAHGLVSAIDLSSFDDRAKVAWADCLELFEDTISQLNRSIKSTNPTSMKEAQTWLSAAITNHQTCQNGFIELNSSSHLASFNPFVLNSFPKLLSNSLAINQAALFNKPGDRRRLLSDGFPTWVSAADRKLLQSTSKASEADLVVAQDGSGKYKTISEAVAASVKLRSGSKRFVIHVKAGVYKENVEIKRSMKNIMFIGDGIDATIVTSNKNVQDGSTTYRSATFGVSGDGFIARDMTFENTAGPQKHQAVAFRSGSDLSVFYSCSFKGYQDTLYVYSQRQFYRNCDIYGTIDFIFGDAVAMIQNCNIYVRRPMNNQWNTVTAQGRTDPNENTGISIHNSRVTAASDLRAVQHSFKTYLGRPWQKYSRTVFMKTYLDSLIDPSGWLEWSGNFALSTLYYGEYMNTGGGAGTSGRVKWSGFHVITSAAEAGKFTVGNFLSGSSWIPATGVPFTLGL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01043 525 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
Eupl11g01043 525 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 173 IPR035513 -
Eupl11g01043 525 Gene3D - 206 525 IPR012334 -
Eupl11g01043 525 FunFam Pectinesterase 206 525 - -
Eupl11g01043 525 Pfam Plant invertase/pectin methylesterase inhibitor 27 170 IPR006501 GO:0004857
Eupl11g01043 525 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 172 IPR035513 -
Eupl11g01043 525 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Eupl11g01043 525 PANTHER PECTINESTERASE 13 515 - -
Eupl11g01043 525 SMART PMEI_2 21 170 IPR006501 GO:0004857
Eupl11g01043 525 SUPERFAMILY Pectin lyase-like 208 524 IPR011050 -
Eupl11g01043 525 CDD PMEI-like_3 27 173 - -
Eupl11g01043 525 Pfam Pectinesterase 212 510 IPR000070 GO:0030599|GO:0042545
Eupl11g01043 525 NCBIfam pectinesterase inhibitor domain 21 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01043 Eupl-Chr11 13900413 13902690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01043 7 525 Carbohydrate Esterase AT1G23200 54.281 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01043 - - nnu:104607345 798.119