Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01033 ATGTTGAAGGAGGAGGAGAATTCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCAGGTGGACCCGCGTGTGCGACTCATGCCGCGCAGCGTTCTGCGCGGTCTACTGCCAGGCTGATTCAGCCTACTTATGTGCAGGATGCGACGCGCGCATCCATGCCACCAATAGGGTGTCATCGCGCCATAAGCGCGTGTGGGTGTGCGAGGCGTGCGAGCGTGCGCCAGCAGCTTTTACCTGCAAGGCTGACGCTGCCGCTCTCTGCACCACATGCGATGCCGACATACACTCGGCCAACGCGCTGGCTCGTCGCCACCACCGCGTCCCAATTCTCCCCATCTCCGGCCTCCTGTACGGACCTTCGGCCACCCACCCGGGTAGGCCTATATGGTCCGAAGTCGATGTGGAGGACGGGTTTTTGGCCCATGAGGCCAATGAGGAGGTAGAGGAAGATGATGAAGATGAAACAGCATCTTGGTTGTTGCTTAATCCTGTTAAGAAAAGTAATGGGTTCTTGTTTGGTGGGGAGGTTGATGAGTACTTGGATCTTGTGGAGTACAATTCATGTACAGAAAATCAGTATCAAGATCAGTATGATCAACAGAACCATGGGAAGAATGATGGGAGTGACAGTGTTGTCCCAGTCCAGAGTGGGACAGTAAAGGAAGAGCAGCAGCGCCAGCAACAACAGAATCTTCAGTTGGAGATGGAGTATGAGGACTCAAAAGCTGGATTCAGTTACACTGCTTCACATAGTCAAAGTGTATCCTTGTCATCTATGGATGCCAGCGTTGTACCAGATGCTACAATGAATGATATCTCAAACATGCACACTAGACCTCCCAAAGGAACGATCGACCTCTTCTCAAGCCCTCCCATTCAGATGCCACCCCAATTCACTCCCATGGACAGGGAAGCCAGAGTCCTTAGATACAGGGAGAAGAGAAAAACAAGAAAGTTTGAGAAGACAATAAGGTACGCCTCGAGGAAGGCCTACGCAGAGACCAGACCCCGGATCAAGGGCCGGTTTGCCAAGAGAACAGATGTAGAATTTGAAGTGGATCAAATGTTCTCCTCCAATATAATGGCTGAAAATGAATACGGCATTGTCCCGTCATTCTAA 1119 0.5183 MLKEEENSGGGGGGGGGGRWTRVCDSCRAAFCAVYCQADSAYLCAGCDARIHATNRVSSRHKRVWVCEACERAPAAFTCKADAAALCTTCDADIHSANALARRHHRVPILPISGLLYGPSATHPGRPIWSEVDVEDGFLAHEANEEVEEDDEDETASWLLLNPVKKSNGFLFGGEVDEYLDLVEYNSCTENQYQDQYDQQNHGKNDGSDSVVPVQSGTVKEEQQRQQQQNLQLEMEYEDSKAGFSYTASHSQSVSLSSMDASVVPDATMNDISNMHTRPPKGTIDLFSSPPIQMPPQFTPMDREARVLRYREKRKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEFEVDQMFSSNIMAENEYGIVPSF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01033 372 ProSiteProfiles Zinc finger B-box type profile. 62 109 IPR000315 GO:0008270
Eupl11g01033 372 ProSiteProfiles CCT domain profile. 303 345 IPR010402 GO:0005515
Eupl11g01033 372 ProSiteProfiles Zinc finger B-box type profile. 19 66 IPR000315 GO:0008270
Eupl11g01033 372 CDD Bbox1_BBX-like 23 66 - -
Eupl11g01033 372 Pfam CCT motif 303 345 IPR010402 GO:0005515
Eupl11g01033 372 MobiDBLite consensus disorder prediction 198 231 - -
Eupl11g01033 372 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 363 IPR045281 GO:0009909
Eupl11g01033 372 SMART bboxneu5 19 66 IPR000315 GO:0008270
Eupl11g01033 372 SMART bboxneu5 67 109 IPR000315 GO:0008270
Eupl11g01033 372 CDD Bbox1_BBX-like 66 109 - -
Eupl11g01033 372 Pfam B-box zinc finger 64 109 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01033 Eupl-Chr11 13666807 13669809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01033 1 372 C2C2-CO-like Transcription Factor Family AT3G02380 54.286 2.50e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Eupl11g01033 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01033 K12135 - nnu:104600461 530.406