Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01024 ATGTCGTCCGACGACTCCGACTACACTTTCTGGTACGGTATCAAAACAATGCCCACACCTTTCAAAGTTATCTTTGGTACCGTATTTGGAATTGTGCTCTGGCCATTTATTTATGGATTTTTCAAGCTCCTCAGAGAGAAGTTAAGAAAACCTGCAGTGGATCATCAGGCCCAAAGCGTCGAGGACGCCGTATCATTACCAGGGCTGCAACCAGATGAGGTGGTCAATGCAGCAACAATGGAGAGGTTTTTCAGCGACATGGCAAGAGAGAAACCGATACGGTTTTCACCTCAGCAACTAAAAGGCTTCACTTGGAATTACTCTAAGAAATTGGGTTCAGGTGGGTTTGGAGTAGTCTACAAAGGAGAGTTTCCGAACGGTGTGCTAGTGGCCGTTAAGGTACTCAACAACAGTGCTAGCGAGGGAGTAAAAGAGCAATTCATGGCAGAAGTGAGCACAATTGGCAGAACTTACCATAGGAATCTAGTCAGACTCTATGGATTTTGTTTTGATGCCAAGATGAAAGCACTTGTCTATGAGTACATGGAAAATGGATCCCTGGACAAGATTTTATTTGACAAGAACCACAATATCGAGTGGGTGAAGTTGTATGAGATTGCAGTCGGGACAGCAAAGGGACTAGAGTACTTGCATGAGGACTGCCAACAAAGGATAATTCACTATGACATAAAGCCCGGTAATGTTCTCCTCGACTCGAATTTCTCTCCTAAGTTTGCAGATTTCGGACTAGCTAAACTTTGTAACAGGGATAATACTCATGTTACCATGACGGGGGGGAGGGGGACCCCCGGTTATGCTGCACCTGAACTGTGGATGCCATTTCCAGTAACCTACAAATGCGATGTTTACAGCTTCGGTATGATGTTGTTTGAAATTGCGGGAAGGAAGAAGAATCTGGACATAACTAAAAGCGAGAGCCAACAATGGTTCCCAAGACAGGTTTGGGAGAAATTTGAAAGTGGAGAACTGGGTGAGATAATAGTAGACTGCAACGAGGTGGACAGAGAGAAGGCAGAGATAATGTTCACAGTTGCTCTATGGTGCGTTCAATACTTGCCCGAGGCAAGACCTACCATGAGCAGTGTGGTAAAATTTTTGGAGGGAGGAGCTGAAGTTATGGCGCCTCCGAACCCGTTTCAGCATCTGGTCTCTTCGGTTGTAGCTTTAGATCTGTGCATGGAAACCAGTGAAGATTCAACAAGAACTGGAGCAACCCATGAGACTGCAAGTTACAAAGATTCCACCCCAATTATGAAAAAGTATGAGATTGAAATGGCTAGTATTTAG 1308 0.4472 MSSDDSDYTFWYGIKTMPTPFKVIFGTVFGIVLWPFIYGFFKLLREKLRKPAVDHQAQSVEDAVSLPGLQPDEVVNAATMERFFSDMAREKPIRFSPQQLKGFTWNYSKKLGSGGFGVVYKGEFPNGVLVAVKVLNNSASEGVKEQFMAEVSTIGRTYHRNLVRLYGFCFDAKMKALVYEYMENGSLDKILFDKNHNIEWVKLYEIAVGTAKGLEYLHEDCQQRIIHYDIKPGNVLLDSNFSPKFADFGLAKLCNRDNTHVTMTGGRGTPGYAAPELWMPFPVTYKCDVYSFGMMLFEIAGRKKNLDITKSESQQWFPRQVWEKFESGELGEIIVDCNEVDREKAEIMFTVALWCVQYLPEARPTMSSVVKFLEGGAEVMAPPNPFQHLVSSVVALDLCMETSEDSTRTGATHETASYKDSTPIMKKYEIEMASI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01024 435 Gene3D Phosphorylase Kinase; domain 1 79 181 - -
Eupl11g01024 435 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Eupl11g01024 435 Gene3D Transferase(Phosphotransferase) domain 1 182 381 - -
Eupl11g01024 435 SUPERFAMILY Protein kinase-like (PK-like) 91 373 IPR011009 -
Eupl11g01024 435 ProSiteProfiles Protein kinase domain profile. 105 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01024 435 Pfam Protein tyrosine and serine/threonine kinase 107 373 IPR001245 GO:0004672|GO:0006468
Eupl11g01024 435 PANTHER OS07G0415500 PROTEIN 85 386 - -
Eupl11g01024 435 FunFam serine/threonine-protein kinase PBS1-like 75 181 - -
Eupl11g01024 435 SMART serkin_6 105 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01024 435 FunFam Putative receptor-like protein kinase 182 381 - -
Eupl11g01024 435 CDD STKc_IRAK 111 375 - -
Eupl11g01024 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01024 Eupl-Chr11 13511677 13514168 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01024 99 385 Receptor kinase-like Gene Family AT1G66980 45.608 1.07e-78 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Eupl11g01024 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01024 - - psom:113355263 498.049