Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01016 ATGTCCACCAACCAGAATGATTCAAACGCCCAGTTAGCCAATTTCAACAATGATATGCCCACGGCTTTGAAAGTTTTCTTTGGTACTCTCTTTGGAATTATGATCTTGTCAGTTATTTGTGGAGTTTTCAACTGTTTATCAAAGAAGTCAGAAAAACCAACAGTGGATCAACAACAGGCCTCGTTACCAGGACTGCAACCAGAACCGGATGTGGGGGTCGATGCAGCAACAATGGAGAGGTTTTTCAGCGACATGGCAAGAGAGAAACCGATACGATTTTCACCTCAGCAACTACAAGGCTTCACTTGGAATTACTCCAAGAAATTGGGTTCAGGTGGCTTTGGAGTAGTCTACAAAGGAGAGTTTCCCAACGGTGTGCGACTAGCTGTTAAGGTACTCAACAACAGTGCTAGCGAGGTTGTAAAAGAGCAATTCATGGCAGAAGTGAGCACAATTGGTAGAACTTATCATAAGAATCTCGTCAGACTCTATGGATTTTGCTTTGATGCCACGATGAAAGCACTAGTCTATGAGTACATGGAAAACGGATCCCTCGACACAATTTTGTTCGACAAGAACCACAGTATTGAGTGGGAGAATTTGTGTGAGATCGCAATCGGGACAGCCAAGGGACTAGCATATTTGCACGAGGATTGCCAACAGAGGATAATTCACTATGATATAAAACCCGGTAATGTTCTTCTAGACTCAAATTTCTCTCCCAAGGTTGCGGATTTCGGATTGGCTAAGCTTTATAATAGGGACAGAACTCACGTCACGATTACTGGAGGTAAGGGGACACCCGGTTACGCAGCGCCGGAAATGTGGATGCCATTTCCAGTAACCTACAAATGCGACGTTTACAGCTTTGGTATGATGTTGTTTGAAATTGTGGGAAGGAAGAGGAATCTGGACATAAACATGAGCGAGAGCCAACAGTGGTTCCCAAAACAGGTTTGGGAGAAGTTTGAAAGTGGAGAACTGGGTGAGATAATAGTAGACTGCGGCATCAAAGAGGAGGAGAAAGAGAAGGCAAAGATAATGTTCATGGTTGCTCTATGGTGCGTTCAATACTTGCCCGATGCAAGACCTACGATGAGCAGTGTGGTGAAAGTTCTGGAAGGAGGAGCTGAAGTTATGGCGCCTCCGAACCCGTTTCAGCATCTGATCTCTTCAGGTGCAGCTTTAGCTATGTCCATGGAAAGCAGTGGAGATTCAACAAGAACTTCTGGAACCTCTGAGACTGCTAATTACAAGGATTCCACTCCAATTATGAGAAAGTATGAGATTGAAATGGCTAGTGTTAGTTCATCATCCTAA 1320 0.4417 MSTNQNDSNAQLANFNNDMPTALKVFFGTLFGIMILSVICGVFNCLSKKSEKPTVDQQQASLPGLQPEPDVGVDAATMERFFSDMAREKPIRFSPQQLQGFTWNYSKKLGSGGFGVVYKGEFPNGVRLAVKVLNNSASEVVKEQFMAEVSTIGRTYHKNLVRLYGFCFDATMKALVYEYMENGSLDTILFDKNHSIEWENLCEIAIGTAKGLAYLHEDCQQRIIHYDIKPGNVLLDSNFSPKVADFGLAKLYNRDRTHVTITGGKGTPGYAAPEMWMPFPVTYKCDVYSFGMMLFEIVGRKRNLDINMSESQQWFPKQVWEKFESGELGEIIVDCGIKEEEKEKAKIMFMVALWCVQYLPDARPTMSSVVKVLEGGAEVMAPPNPFQHLISSGAALAMSMESSGDSTRTSGTSETANYKDSTPIMRKYEIEMASVSSSS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01016 439 Gene3D Phosphorylase Kinase; domain 1 77 179 - -
Eupl11g01016 439 FunFam serine/threonine-protein kinase PBS1-like 74 179 - -
Eupl11g01016 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Eupl11g01016 439 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Eupl11g01016 439 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01016 439 PANTHER OS07G0415500 PROTEIN 22 386 - -
Eupl11g01016 439 Pfam Protein tyrosine and serine/threonine kinase 105 373 IPR001245 GO:0004672|GO:0006468
Eupl11g01016 439 SMART serkin_6 103 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g01016 439 FunFam Putative receptor-like protein kinase 180 381 - -
Eupl11g01016 439 Gene3D Transferase(Phosphotransferase) domain 1 180 381 - -
Eupl11g01016 439 SUPERFAMILY Protein kinase-like (PK-like) 89 373 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01016 Eupl-Chr11 13287290 13289034 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01016 92 407 Receptor kinase-like Gene Family AT5G38280 41.358 1.10e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Eupl11g01016 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01016 - - psom:113355263 502.671