Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01014 ATGAAAGGTCGATCTGTGAAACTTAAGGAAGCTCACAAGAACAATAATGACGTCAGCGCTTTCTGCTCTATTCTCTGGGACCTTGAAGCTCAACATCTCGTCACTTCCTGCGCTTCGGATTCCTCGATTTCCATTCACGATCTCCTTCAGCCTTCGAAGCCCCCCAAGATCCTTCGCCACCACAAAGACGGCGTTACTGCTTTGGCTCTCAGCCCCAATTCGACGTGTCTTGCTTCTGGCTCTGTCGATCATTCTGTCAAGCTTTATAGGTTTCCAGGTGGAGAGTTTCAGACTAATGTAACCAGGTTCACATTACCGATCCGTGTCCTTGCTTTTAACAAGTCAGGTAGCATGTTGGCTGCTGCTGGTGATGATGAGGGAATTAAACTAATTAATACTATTGATGGTTCAATTGCGAGGGTTCTGAAGGGACATAAAGGACCTGTCACTGGCTTAGCTTTTGATCCTAACAGTGAGTACTTGGCATCTGTTGATTCAATTGGGACTGTTATATATTGGGAACTCTGTTCCGGGAGAACATTACATACCCTTACAGGCATAGCTCCTGATTCTGGTTCGGACACTTCGGTCTCTAATGTATTGAGCTGGAGTCCTGACGGGGATGTCTTAGCCATACCAGGTTTGAAAAGTGATGTAGTAATGTATGACAGGGACACTGCTGAGAAGCTCTTCTCACTTAGAGGTGAACATGGGCAATCTGTTTGTTTCTTGTCCTGGTCCCCTAATGGGAAATACATGGCCACTTCCGGTTTAGATAGGCAGGTCTTGATCTGGGATGTTGATAAAAAGCAGGACATTGATCGCCAAAAATTTGATGATAGAATATGTTGTATGGCTTGGAAGCCAAATGGGAATTCTTTGGCTGTTATTGATATTATGGGAAAGTATGGTCTGTGGGAATCTGCTGTTCCTTCATCTATGAAATCTCCTACAGATGGTGCTCCTAGTCTAAAATCAAAAAGTAATGGGTTACTTTTGTTTGATGAAGATGATCAAGAGCCTAGCATTTCAGGTAGTTTGAGTGATGTTGGTGAAGATAGTCTTGGTGAATCTGAACCAGTTAGCAGGAAAAGACTACGCAAACAGTCTGTATTTGACAACATGTTGGATGAAGATAGTGATGATCAAGTGGGCTTGCTTTCTAAGGTTGAACCACACAAAAAAGCTTCTCGTAGTCACAAGGAAAGCTTATATGATGACAAGGTAGAACTTGGAAGTGCGACGAAGCCTGGAAGACCAAAGATGCAGGAGGCATTTCAGCCAGGTTCTACACCTGGGCAGGCTGGGAAGCGACGTTTCCTGTGTTACAATTTGCTTGGAAGTATAACAACAATTGAACATGATGGATATTCCCACATAGAGGTTGATTTTCATGACACTGGGAGAGGTCCTCGTGTTCCTTCAATGACTGATTATTTTGGTTTCACAATGGCTTCACTTAATGAGAATGGGAGCGTGTTTGCAAATCCATGTAAGGGTGAGAAGAACATGAGTACCCTGATGTATCGCCCGTTCAGTAGCTGGGCAAATAACAGCGAGTGGTCTATGCGGTTTGAAGCAGAAGAAGTAAAGGTTGTGGCCCTTGGTGCTGGTTGGATTGCTGCTGTTACCAGTCTTAATTTTCTTCGCATCTTCACTGAGGGTGGCTTGCAGAAGTATGTTCTCTCCCTCGATGGACCAGTAGTGACTGCATCAGGCTTCAAGGATGAACTGGCCATTGTCACTCATGCTTCCCATTGCCTTCCTTCAAATGATCAGATGCTAGATTTCAGAGTGTTCAACATTTCTAGTGGAACCCAGCCCCTCAGAGGTCATCTTCCGTTGACTCCCGGTTCAAGTCTAATTTGGTTTGGGTTCAGTGAAGAAGGCCAACTAAGTTCATATGATTCTAAGGGAGTGCTGAGAGTGTTCACTGACCAGTATGGGGGCAGCTGGCTTCCACTCTTCAGTGGCAGTAAAGAGAAAAAGTCTGAGGAGAGCTATTGGGTGGTTGGTTTGAATGCAAGCAAGTTGTTTTGTATTGTTTGCAAATCTCCTGATTCATACCCACAGGTGATACCCAAGCCAGTTCTAACACTCTTAAGCTTTTCATTTCCTCTTGCATCCTCTGATCTGGGAGCAGATGATCTTGAAAATGAGTTTATTTTGAGCAACCTATATCTCTCACAGACTCAGAGAAGGATTGAAGACATGACTGCTGCTGGTGTAGACCCCAGTTCAGTTGATGACGAGGCTTTCAACATGGAAGCATCTCTTGATAGATGCATCTTGAGGCTTATCGCAGCCTGCTGCAACGGTGATAAGCTTGTGCGGGCTACTGAACTTGTGCGTCTTCTGTCATTGGAGAAATCGGTGAAAGGCGCGATAAAGCTTGTTACTGCTCTGAAGCTTCCAGTTTTGGCAGATCGGTTCAATGGCATACTGGAGGAAAGGTTGCTGAATGAAACTACGGAGACAACATACCCAAATTCAACCTCTGATGCAGCCCTCACAAATGGTGTTGAAGTACACGAGACTTTAACTGTGGCTGGAAACAAAAGAACATCAGAACCTACACTTCCGTTACCTCCACCGAAGTTGCCTTCACCTCTTTATTCAAAACAAGAGAAAGGCATAAAGGAGGGAGGCAATAGAACTGTGGGTCAGGGGAACATAAAGGAGGGTGCTAATCAGGTGCAGTTTTGTCGCCCGGCTAATACATTTTCAAAGGTGTCAAACAACCAGGAGAAGCCACCTTTGTCCAATTCTATCAATGGAACTGCGAGTGAGGGAAACATAAAGGAGGGGATCAATCAGGTCCAGATTCATCGCCCGGCCAATCCATTTGCAAAGGCATCAAACAACCAGGAGAAGCCATCTCTGTTCGATTCTATCAAGAAGATGAAGGTGAACAATGGAAGTACAAGCTAA 2931 0.4476 MKGRSVKLKEAHKNNNDVSAFCSILWDLEAQHLVTSCASDSSISIHDLLQPSKPPKILRHHKDGVTALALSPNSTCLASGSVDHSVKLYRFPGGEFQTNVTRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASVDSIGTVIYWELCSGRTLHTLTGIAPDSGSDTSVSNVLSWSPDGDVLAIPGLKSDVVMYDRDTAEKLFSLRGEHGQSVCFLSWSPNGKYMATSGLDRQVLIWDVDKKQDIDRQKFDDRICCMAWKPNGNSLAVIDIMGKYGLWESAVPSSMKSPTDGAPSLKSKSNGLLLFDEDDQEPSISGSLSDVGEDSLGESEPVSRKRLRKQSVFDNMLDEDSDDQVGLLSKVEPHKKASRSHKESLYDDKVELGSATKPGRPKMQEAFQPGSTPGQAGKRRFLCYNLLGSITTIEHDGYSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEAEEVKVVALGAGWIAAVTSLNFLRIFTEGGLQKYVLSLDGPVVTASGFKDELAIVTHASHCLPSNDQMLDFRVFNISSGTQPLRGHLPLTPGSSLIWFGFSEEGQLSSYDSKGVLRVFTDQYGGSWLPLFSGSKEKKSEESYWVVGLNASKLFCIVCKSPDSYPQVIPKPVLTLLSFSFPLASSDLGADDLENEFILSNLYLSQTQRRIEDMTAAGVDPSSVDDEAFNMEASLDRCILRLIAACCNGDKLVRATELVRLLSLEKSVKGAIKLVTALKLPVLADRFNGILEERLLNETTETTYPNSTSDAALTNGVEVHETLTVAGNKRTSEPTLPLPPPKLPSPLYSKQEKGIKEGGNRTVGQGNIKEGANQVQFCRPANTFSKVSNNQEKPPLSNSINGTASEGNIKEGINQVQIHRPANPFAKASNNQEKPSLFDSIKKMKVNNGSTS* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01014 976 SUPERFAMILY WD40 repeat-like 21 307 IPR036322 GO:0005515
Eupl11g01014 976 MobiDBLite consensus disorder prediction 383 414 - -
Eupl11g01014 976 Pfam Minichromosome loss protein, Mcl1, middle region 425 707 IPR022100 -
Eupl11g01014 976 ProSiteProfiles Trp-Asp (WD) repeats profile. 58 99 IPR001680 GO:0005515
Eupl11g01014 976 CDD WD40 15 296 - -
Eupl11g01014 976 Gene3D - 99 342 IPR015943 GO:0005515
Eupl11g01014 976 MobiDBLite consensus disorder prediction 336 367 - -
Eupl11g01014 976 MobiDBLite consensus disorder prediction 383 433 - -
Eupl11g01014 976 MobiDBLite consensus disorder prediction 948 976 - -
Eupl11g01014 976 MobiDBLite consensus disorder prediction 852 871 - -
Eupl11g01014 976 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 234 268 - -
Eupl11g01014 976 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 142 175 - -
Eupl11g01014 976 MobiDBLite consensus disorder prediction 909 936 - -
Eupl11g01014 976 SMART WD40_4 269 307 IPR001680 GO:0005515
Eupl11g01014 976 SMART WD40_4 51 90 IPR001680 GO:0005515
Eupl11g01014 976 SMART WD40_4 177 223 IPR001680 GO:0005515
Eupl11g01014 976 SMART WD40_4 2 47 IPR001680 GO:0005515
Eupl11g01014 976 SMART WD40_4 93 132 IPR001680 GO:0005515
Eupl11g01014 976 SMART WD40_4 135 174 IPR001680 GO:0005515
Eupl11g01014 976 SMART WD40_4 226 266 IPR001680 GO:0005515
Eupl11g01014 976 Gene3D - 2 98 IPR015943 GO:0005515
Eupl11g01014 976 Pfam WD domain, G-beta repeat 140 163 IPR001680 GO:0005515
Eupl11g01014 976 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Eupl11g01014 976 ProSiteProfiles Trp-Asp (WD) repeats profile. 142 183 IPR001680 GO:0005515
Eupl11g01014 976 ProSiteProfiles Trp-Asp (WD) repeats profile. 234 275 IPR001680 GO:0005515
Eupl11g01014 976 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1 958 - -
Eupl11g01014 976 MobiDBLite consensus disorder prediction 909 976 - -
Eupl11g01014 976 Pfam Anaphase-promoting complex subunit 4 WD40 domain 201 288 IPR024977 -
Eupl11g01014 976 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 58 89 - -
Eupl11g01014 976 ProSitePatterns Trp-Asp (WD) repeats signature. 253 267 IPR019775 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01014 41 280 U-box Gene Family AT1G04510 22.222 5.60e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01014 K11274 - msin:131258047 1457.58