Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00998 ATGGCACATTCAACTGATTTGGTTATTATTGGTGTCTCCGTTGGTGTGGCCATTGGCCTCTTGATAGCGTTTTGTGCATTTGTTGGTATAAGGTGGTATATAAAGCGTTCTCAAAATCAACGCTGTGTAACTGAGCGTGGTGTAACATCAATCCCTATACGTATGAATGGCATGGATACAAGCATTGAGTCCAGTGCATCAATCTCGAATTCCATAGCTGTTCATGGCTTGCAGCAGCCAGCAAGAAGAGCTCACCGGTCTTTGTGGAACCACCACAATAAAGATCTTCTCTCTTCAACGTCTGGCATCCTGAGATACTCATACAAGGATATTCAAAAAGCCACACAAAACTTTACAACTATTTTAGGAGAGGGATCTTTTGGTCCGGTCTATAAAGCTACAATGCCTACAAGTGAAGTCGTGGCCGTCAAGGTGCTCGCTTCTAATTCAAAACAGGGGGAGAAAGAGTTCCAAACAGAGGTACTTTTATTAGGTAGGCTCCATCACCGGAATCTTGTGAACTTGGTGGGATATTGTGTAGATAAAGGTCAGCACATGTTGATCTATGAATATATGAGTAATGGGAGTTTGGCAAACCTTTTATATAATGAAGGTGAACGAGTTTTGAGCTGGGAAGAAAGGCTTCAAGTCGCTCTCGATGTTTCACATGGAATTGAATATCTTCATGAAGGGGCGGTTCCACCCGTCATACATCGGGATCTGAAGTCTGCTAATATATTGTTGGACAAATCGATGAGGGCTAAGGTTGCTGATTTTGGGCTGTCCCGGGAAGAGGTCTATGATGGCAGAAACTCCGGCCTAAAGGGTACATATGGTTACATAGACCCCGATTACATGTCCACGAACAAGTTCACAAAGAAGAGTGACATTTACAGTTTCGGGATTATTATCTTTGAACTCATTACCGCTATCCACCCACAGCAAAACCTAATGGAGTATGTCAATCTCGCGGCCATGAGTCCGGATGGTGTGGACGAAATACTTGACAAGCCACTCATTGGGAAATGCAATCCTGTAGAGGTGAGGCTCCTCGCCAGCATTGCACACAGATGCTTGCACAAAACACCGAGAAAACGCCCATCAATCGGAGATGTTTCGCAGGCCATATCAAAGATAAGACAGCGACGTCTAACCAAGGAAGATACAATGTCTTTCCCAGGAGGAGATGTTCCTCAGGTCCTAAGGTGCATAGAGCATCAGCAAGTGGAGTTGAGCAACATGGCCAGCATCAAAGAGAGAGTACAGGCATAA 1272 0.4458 MAHSTDLVIIGVSVGVAIGLLIAFCAFVGIRWYIKRSQNQRCVTERGVTSIPIRMNGMDTSIESSASISNSIAVHGLQQPARRAHRSLWNHHNKDLLSSTSGILRYSYKDIQKATQNFTTILGEGSFGPVYKATMPTSEVVAVKVLASNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQHMLIYEYMSNGSLANLLYNEGERVLSWEERLQVALDVSHGIEYLHEGAVPPVIHRDLKSANILLDKSMRAKVADFGLSREEVYDGRNSGLKGTYGYIDPDYMSTNKFTKKSDIYSFGIIIFELITAIHPQQNLMEYVNLAAMSPDGVDEILDKPLIGKCNPVEVRLLASIAHRCLHKTPRKRPSIGDVSQAISKIRQRRLTKEDTMSFPGGDVPQVLRCIEHQQVELSNMASIKERVQA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00998 423 CDD STKc_IRAK 122 379 - -
Eupl11g00998 423 SUPERFAMILY Protein kinase-like (PK-like) 89 373 IPR011009 -
Eupl11g00998 423 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 400 - -
Eupl11g00998 423 Gene3D Transferase(Phosphotransferase) domain 1 192 393 - -
Eupl11g00998 423 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
Eupl11g00998 423 Pfam Protein tyrosine and serine/threonine kinase 118 374 IPR001245 GO:0004672|GO:0006468
Eupl11g00998 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Eupl11g00998 423 SMART serkin_6 116 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00998 423 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 382 - -
Eupl11g00998 423 ProSiteProfiles Protein kinase domain profile. 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl11g00998 423 Gene3D Phosphorylase Kinase; domain 1 80 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00998 Eupl-Chr11 12920912 12939549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00998 98 381 Receptor kinase-like Gene Family AT2G28970 44.068 1.27e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Eupl11g00998 PK_Tyr_Ser-Thr 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00998 - - nnu:104600139 677.552