Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00995 ATGGAGCTTCCTCAACCTCGCCCCTTTGGAACCGAAGGTAAAAAACCAACGCACGATTTTCTTTCACTGTACAGCCATCCATCTTTCCAGCACCAAGATCCAAGGCCTTCTCAAGAAATCTACCTTAAAACTCGTGATTTTCTACAACCACTGGAAAGCGTAGGGAAGAACAGTGCCAAGGGAGAAAGCACGGTGGATACATCTGCTGCAGAAAAGCCACCAACGCTGCCTCCTCCTCCTTCGGTCGAGCACGTTCTCCCGGGAGGTATCGGCACCTATAGCATAAGCCACATTTCCAATTTCAATCAGCGGGTTTTGAAGTCTGAGAGACCCGTAAGCAGTGCAGAGAGAAGCAGCGAAGTTAACAAAACCAACTCTAGCTGTAATTCCTACAGTGGAGGTTCATTTACTATGTGGGAAGAATCTGTGATTAAAGATAAAGGTTCGAGCGGGAAGGACAGACAAGTTTTAAGAGAATCGACGGAGAAGCTAGAGCAGTGGTCATCGGGGCGGGCATTACAGGCCCCTTTCATCCATCGCAACAGCTTCAGCTCTCTGCCATCCTCCAAGCAAACGTCCCAGAAAAACCAGAGCTTCATGGAGATGATGAATTCCGTGAAGGGTCATCAGGAAGACGAAGACGACGATGAGGAAGAGTTCGTTATGAAGAAAGATGGCTCTTCCCAGAAAGACTTGACGGTAAAAGTAGACGGCAAGAACTCCGATCAGAAGGCTAACACACCACGATCGAAGCACTCTGCCACAGAGCAGCGGAGGAGGAGCAAGATCAACGACAGGTTTCAGATATTGAGAGATCTGATACCCCAAAATGATCAGAAGAGAGATAAGGCATCGTTCCTATTAGAGGTCATCGAGTACATTCAGTATTTACAGGAGAAAGTAAATAAGTATGAGACATCCTACCAAGGATGGAATCAGGAACCCACGAAGTTGATGCCATGGAGAAACAATCATGGGCCCGGAGAAAGTATGGTTGATCATTCTCGAGCCATAAAGAATAGCACTGGTCCAGGGTTGATTCTTGCTGGAAAGTTTAATGACAACGCCACTATCACCCCAACCATGCTTGCAAATGCACAGAACCCAGTAGAGTCTGACCTAAACACGGGTGCCGCCTACCAACCAATGGATCCCCATCCTGGCCTTGCAAACAAGGCAGTACCTCTTCCAGTTCCTTTGCAACCAAACATGTTCACTCCTACTGGGAGGAGTGGTGGGCTTGCCCAACCCCCACAGAGATCAATTTCTGATGCAGAGAACATGGTATCCCAGCCTCAATCACATTTGTGGCAGAGTAGAGCATGTACACCCGAGTGTCCAATCATAAGCAATACACAGAACAAACAGGAGCAAATGGCAATTGAAGGAGGGACAATTAGCATCTCAAGTGTTTATTCACAAGGGTTGTTGAATAATTTGACACAAGCACTGCAGAGCTCGGGTGTGGATCTTTCACAAGCTAGCATCTCATTGCAAATTGATCTTGGGAAGCGAGCAATTAGTAGGATGACCACAACATCCAGTGCTAAGGTATGCATTTGGGGGTATTTTAGCTATTTCCAGTTTTTCCTTCTATTTTATGTTTTTTTGGGTCATGTGCTTTTGCATTCATGTCCAAAAGAAAAATGGGAAGCCACAGATAATAGATGTTGGCCTGAAAGTGTACAGGGGAATAACTGGATTTACCATAGCTTTGTAAATACAACAAATCCTACTGGATACCATCCAATCATTAGGTCTCTTAGAAATCAGCCTAAGCATATGATTAATGTGTTTGTTATGGGACTGGGGGATGAGCATAGGGTAATCCTAAGGGAATTACTAAACAGACCCAGTACTTGGATGATCCTTTGTACACTAGAGACCCTGTGA 1893 0.4564 MELPQPRPFGTEGKKPTHDFLSLYSHPSFQHQDPRPSQEIYLKTRDFLQPLESVGKNSAKGESTVDTSAAEKPPTLPPPPSVEHVLPGGIGTYSISHISNFNQRVLKSERPVSSAERSSEVNKTNSSCNSYSGGSFTMWEESVIKDKGSSGKDRQVLRESTEKLEQWSSGRALQAPFIHRNSFSSLPSSKQTSQKNQSFMEMMNSVKGHQEDEDDDEEEFVMKKDGSSQKDLTVKVDGKNSDQKANTPRSKHSATEQRRRSKINDRFQILRDLIPQNDQKRDKASFLLEVIEYIQYLQEKVNKYETSYQGWNQEPTKLMPWRNNHGPGESMVDHSRAIKNSTGPGLILAGKFNDNATITPTMLANAQNPVESDLNTGAAYQPMDPHPGLANKAVPLPVPLQPNMFTPTGRSGGLAQPPQRSISDAENMVSQPQSHLWQSRACTPECPIISNTQNKQEQMAIEGGTISISSVYSQGLLNNLTQALQSSGVDLSQASISLQIDLGKRAISRMTTTSSAKVCIWGYFSYFQFFLLFYVFLGHVLLHSCPKEKWEATDNRCWPESVQGNNWIYHSFVNTTNPTGYHPIIRSLRNQPKHMINVFVMGLGDEHRVILRELLNRPSTWMILCTLETL* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00995 630 MobiDBLite consensus disorder prediction 146 165 - -
Eupl11g00995 630 Coils Coil 294 314 - -
Eupl11g00995 630 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 247 326 IPR036638 GO:0046983
Eupl11g00995 630 SMART finulus 253 303 IPR011598 GO:0046983
Eupl11g00995 630 Gene3D - 244 318 IPR036638 GO:0046983
Eupl11g00995 630 MobiDBLite consensus disorder prediction 206 262 - -
Eupl11g00995 630 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 11 515 IPR044295 GO:0003700|GO:0006351|GO:0046983
Eupl11g00995 630 MobiDBLite consensus disorder prediction 221 262 - -
Eupl11g00995 630 MobiDBLite consensus disorder prediction 1 88 - -
Eupl11g00995 630 Pfam Helix-loop-helix DNA-binding domain 249 298 IPR011598 GO:0046983
Eupl11g00995 630 CDD bHLH_AtBIM_like 246 322 - -
Eupl11g00995 630 MobiDBLite consensus disorder prediction 23 37 - -
Eupl11g00995 630 FunFam BHLH domain class transcription factor 245 317 - -
Eupl11g00995 630 MobiDBLite consensus disorder prediction 56 70 - -
Eupl11g00995 630 MobiDBLite consensus disorder prediction 117 132 - -
Eupl11g00995 630 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 247 297 IPR011598 GO:0046983
Eupl11g00995 630 MobiDBLite consensus disorder prediction 146 169 - -
Eupl11g00995 630 MobiDBLite consensus disorder prediction 105 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00995 Eupl-Chr11 12852224 12865181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00995 1 508 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 44.936 1.01e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00995 HLH 4.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00995 - - nnu:104600095 677.552