Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00967 ATGGTTGGGCTGGTTGGGTGGGAAGTTATCAGGCAAGGATGGAGAAAGGGCCCTTGGACTGCTGATGAAGATAAATTGCTTACTGAGTATGTTAGTTTGCATGGGGAAGGAAGATGGAGTTCTGTCGCTAGGCCCGCAGGCCTGACCTTAAGAAGAGGTCAAATGAGTTCTCAAGAAGAGAGCATCATCATAGAGCTGCATGGCTTATGGGGAAACAAATGGTCTATGATTGCCCGATGCTTGCCTGGGAGGACGGACAACGAGATCAAGAATTATTGGAGAACACGTTTCAAGAGTAAAGGTAAATCCTCACACAGTACTGAAGATAAACCAAGAGCTCGACCTTTGAAACGACAACTGAAGAAAGAACAACAACAGCAAGAAGAACAAGTACAGCTGCCTCAGCTTGAAGACGGTGATAACAAAGTATCTTCGGCACATGGTACGCAAGAGATGGTCACTATTACCTTAGAGGATCAATGGCTACCTGTGATGTTTCAAGACAGTGCCTCCTTGCCGGATTCCTTTGGTGAGGAGAGCTTATGGGGTGGTTTGTGGAACTTGGATGATGTGATCTAG 579 0.4629 MVGLVGWEVIRQGWRKGPWTADEDKLLTEYVSLHGEGRWSSVARPAGLTLRRGQMSSQEESIIIELHGLWGNKWSMIARCLPGRTDNEIKNYWRTRFKSKGKSSHSTEDKPRARPLKRQLKKEQQQQEEQVQLPQLEDGDNKVSSAHGTQEMVTITLEDQWLPVMFQDSASLPDSFGEESLWGGLWNLDDVI* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00967 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 101 IPR017930 -
Eupl11g00967 192 Gene3D - 14 47 - -
Eupl11g00967 192 MobiDBLite consensus disorder prediction 98 125 - -
Eupl11g00967 192 MobiDBLite consensus disorder prediction 98 146 - -
Eupl11g00967 192 SUPERFAMILY Homeodomain-like 13 93 IPR009057 -
Eupl11g00967 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 44 IPR017930 -
Eupl11g00967 192 SMART sant 51 99 IPR001005 -
Eupl11g00967 192 SMART sant 15 50 IPR001005 -
Eupl11g00967 192 MobiDBLite consensus disorder prediction 126 146 - -
Eupl11g00967 192 CDD SANT 18 95 IPR001005 -
Eupl11g00967 192 ProSiteProfiles Myb-like domain profile. 11 97 IPR001005 -
Eupl11g00967 192 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 50 139 IPR044676 GO:0003700|GO:0006355|GO:0043565
Eupl11g00967 192 Gene3D - 56 100 - -
Eupl11g00967 192 Pfam Myb-like DNA-binding domain 52 95 IPR001005 -
Eupl11g00967 192 Pfam Myb-like DNA-binding domain 16 44 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00967 Eupl-Chr11 12363434 12364787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00967 13 190 MYB Transcription Factor Family AT3G30210 45.320 1.98e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl11g00967 Myb_DNA-binding 3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00967 K09422 - ming:122085672 200.29