Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00966 ATGTGTGGTCTCAGACATTATACATGGTTTTCTTCCGTGAATTGTGGTCGGCATTTACATAATTTCTGCAACTTTGATTTTCTGTTCTTTGAAATGGAGTCTTGGAGCTATGGTCCTGAAGGGAAGGGTTTTGTGTTATCTGGTGAAGCGGTTCCACCTACTGATGCTCGTGCAAGAAGTGGAAAAACCTCCTGTAATTACGGAAATGCCATGCTTGTGGATCGAGAGGCCATCGAGAACCAGGGATTCATGGAATTAGGGTTCCCCGAGATCATCAGAAAACCACTTCCCGACAACCCAAATTGGGGGTTTTTGGGTGGTAATATTGGTACCGAAAGAGTAGCTTCCCCGTCTTGTCTGGTTACCCCAGAAGTGTTTTCCAGAGAAGAGTACAGTTCAAGGCTTTCAAGATCTGTCGTGGATTCTGACAGTAGGGATTCTTCACTCATCGATTTAAAGCTGGGCAGGTTAGCTGATTGTGGAGATGCACAATATAGTAAATCCTCCAAAGAGATGCCAGTTTCATCATCAATGGTGTTGTCCGTCCCAGCAAAGAGAGCACGCACAATTTTGACCTCTCAGACTCCCTTTTGCCAAGTTCGTGATTGTAACATGGATCTCAGCTCCTCGAAAGACTACCACAAGAAGCATAAAGTTTGTGACATTCACTCAAAAACAGCCAAAGTTATCGTGAATGGCATCGAACAGAGGTTTTGCCAGCAGTGTAGCAGGTTTCATTTGCTGGCTGAATTTGATGATGGTAAGCGTAGTTGTCGTAAACGCCTTGCAGGCCACAATGAGCGTCGCAGGAAGCCTCAACTGGATAATCACTCTGTTAAAAATACAAAGCTGCTTCTGTCATATCACGGTAGCAGGTTTCCAGGGACTTCCTTACCAGCAAGGACATCCTTTATTTGCCCGGATATATTTCCAAGTGGCATTCTGCATCCAGTTAGACATGAAACCAGTAACTGGTGTGGCCATGTAAAATTAGAAAATGAGGCAATTTATAATTCTCAGTCAGTGATACCCATCACAAATAAAAATTCGATTCCGAAATCTTTCCTCCCTCCGTATGGCTTGGAGAAACAGCATCCTTCCTTGCATGGAAATGGAAGTGATACACCAGGAAGCTTTTTCTACAAAAACAGTTACCAGTACCCACACGATTTGGCCAGCCCAAATTCTGTCTCAAGATCGCTGTTTCAGTACACCTCATCAGGAAGCGAAGACTTCACTGTTTCTGATACTGCATCAACCATCCAAGTTTTATCCGGGGTCTCGGACTCCAGTTGTGCTCTCTCTCTTCTGTCATCTCAATCACAGAACTCATCAAGCCATTCATCAGGAATTCCCATGGCTCAGTCACTGATCATCCAAGGTGGTCATGCCCATTACAGTATGGGTCAATTCCCTAAAAATCTTTTAAGAGTAAGCTCACAAGCTTCGACAAGTGAGGTGTCAAATAGGTTTTCTTCATCAGGGATTAACTCTGTAGAAGTTGATCACCTGGGGCCTGTACTGGTTTCTGATGCCAGCAATGCTGTTGACTTTGAAGTCCACATGGATGGGATTTTTCAAAGATCAGATTTTGTGAATGCAAAGGATCCTATATCTCATGAACATGGTACCACTGTTGACTTGCTTCAATTATCGTCACAGCTGCAATGTGTGGAGCGCCAGAGGCACTCCGCGCAAGTGAAGCAGGAAAATGATGTCTTCTGCTGCCTCCCTATTACCTAA 1743 0.4429 MCGLRHYTWFSSVNCGRHLHNFCNFDFLFFEMESWSYGPEGKGFVLSGEAVPPTDARARSGKTSCNYGNAMLVDREAIENQGFMELGFPEIIRKPLPDNPNWGFLGGNIGTERVASPSCLVTPEVFSREEYSSRLSRSVVDSDSRDSSLIDLKLGRLADCGDAQYSKSSKEMPVSSSMVLSVPAKRARTILTSQTPFCQVRDCNMDLSSSKDYHKKHKVCDIHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQLDNHSVKNTKLLLSYHGSRFPGTSLPARTSFICPDIFPSGILHPVRHETSNWCGHVKLENEAIYNSQSVIPITNKNSIPKSFLPPYGLEKQHPSLHGNGSDTPGSFFYKNSYQYPHDLASPNSVSRSLFQYTSSGSEDFTVSDTASTIQVLSGVSDSSCALSLLSSQSQNSSSHSSGIPMAQSLIIQGGHAHYSMGQFPKNLLRVSSQASTSEVSNRFSSSGINSVEVDHLGPVLVSDASNAVDFEVHMDGIFQRSDFVNAKDPISHEHGTTVDLLQLSSQLQCVERQRHSAQVKQENDVFCCLPIT* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00966 580 Gene3D - 190 259 IPR036893 GO:0003677|GO:0005634
Eupl11g00966 580 FunFam Squamosa promoter-binding-like protein 14 189 259 - -
Eupl11g00966 580 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 132 567 IPR044817 GO:0003677
Eupl11g00966 580 ProSiteProfiles Zinc finger SBP-type profile. 195 272 IPR004333 GO:0003677
Eupl11g00966 580 Pfam SBP domain 198 271 IPR004333 GO:0003677
Eupl11g00966 580 SUPERFAMILY SBT domain 196 277 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00966 Eupl-Chr11 12333016 12341436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00966 32 321 SBP-box Gene Family AT1G69170 37.884 8.75e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl11g00966 SBP 1.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00966 - - nnu:104597891 690.649