Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00954 ATGACAATCGACAGGTTCACAGACCCAATTCATGAAAATTCCATGACAATTGAAGCCAAGGATCGTTGGTTACAATGTCGATGCTACCCACTTCTGAATTTGAGATTAGCCATCTCTGCGTTCGTCTTTTTCGTGATCTTTTCGCATGCAGCTGCATATGATCCATTGGATCCAAATGGAAACATTACAATCAAATGGGATGTAGTATCTTGGGCCGCAGATGGCTATGTGGCAGTGGTGACAATGAACAATTTTCAAATGTACCGGCACATTATGACTCCGGGCTGGACTTTAGGATGGACATGGCCTAAGAAAGAAGTGATCTGGTCTATGGTGGGAGCCCAAACGACTGAGCAAGGAGATTGTTCCAAGTTCAAGGGGACCATCCCACATTGTTGCAAGAAGACTCCCACCGTCGTCGACTTGCTCCCAGGAGTCCCATACAACCAACAAATTGCCAACTGCTGCAAGGGTGGAGTGGTGTCATCGTGGGGACAAGATCCCTCAGGCTCAGTCTCATCGTTCCAGGTGAGTGTTGGGCTTGCAGGGACTTCAAACAAGACGGTGAAACTGCCAAAGAACTTCACGTTGCTTGGCCCAGGGCTGGGGTACACCTGCGGCCCTGCAAAAATTGTGCCATCCACCACCTTCCTCACAGCTGACCGTCGCCGAAAAACTCAAGCACTGATGACATGGAATGTGACCTGCACTTATTCAGAGTTCCTTGCCCGGAAGAACCCAAGCTGTTGTGTCTCCTTCTCATCTTTCTACAATGAAACCATCACTCCTTGTCCCTCTTGTGTTTGTGGTTGCCAAAACAAACGCAACTGTGTCAAAAGTGATTCAAAGCTGCTAAGCATAGTGGGAGTCAACACCCCAAAGAAGGATAACACGCCGCTGCTGCAGTGCACGCATCACATGTGTCCGATCCGGGTGCACTGGCACGTGAAACTCAATTACAAAGAGTACTGGCGAGTGAAGGTCTCCATTACCAATTTCAATTACAGGCTGAACTACACCCAGTGGACCCTTGTCGCTCAACACCCGAATCTCAACAACGTTACCCAAGTCTTTAGCTTCGACTACAAGCCCCTCGTTCCCTACCAGTCTATAAATGACACAGGTATGTTCTATGGCATGAAATTCTATAATGACCTGCTAATGGAGGCAGGGCCACAAGGAAATGTCCAGTCGGAGGTTCTTCTTATGAAGGACAAGGATACATTCACTCTAAAGCAGGGATGGGCGTTTCCTCGGAGGGTCTACTTTAATGGTGACGAGTGCATGCTACCCCCACCCGATACGTACCCGTACCTGCCAAATTCCGCCTATTCAAACCCTGTCACATTCACAACACTGGCCACTTCGGTGCTTTTCTTACTGATGGTCATTGTGTGA 1398 0.485 MTIDRFTDPIHENSMTIEAKDRWLQCRCYPLLNLRLAISAFVFFVIFSHAAAYDPLDPNGNITIKWDVVSWAADGYVAVVTMNNFQMYRHIMTPGWTLGWTWPKKEVIWSMVGAQTTEQGDCSKFKGTIPHCCKKTPTVVDLLPGVPYNQQIANCCKGGVVSSWGQDPSGSVSSFQVSVGLAGTSNKTVKLPKNFTLLGPGLGYTCGPAKIVPSTTFLTADRRRKTQALMTWNVTCTYSEFLARKNPSCCVSFSSFYNETITPCPSCVCGCQNKRNCVKSDSKLLSIVGVNTPKKDNTPLLQCTHHMCPIRVHWHVKLNYKEYWRVKVSITNFNYRLNYTQWTLVAQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFYGMKFYNDLLMEAGPQGNVQSEVLLMKDKDTFTLKQGWAFPRRVYFNGDECMLPPPDTYPYLPNSAYSNPVTFTTLATSVLFLLMVIV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00954 465 Pfam COBRA-like protein 76 239 IPR006918 GO:0010215|GO:0016020
Eupl11g00954 465 PIRSF COBRA 27 465 IPR006918 GO:0010215|GO:0016020
Eupl11g00954 465 PANTHER PROTEIN COBRA 40 457 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00954 Eupl-Chr11 12213251 12216606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00954 31 463 COBRA Gene Family AT3G02210 63.470 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00954 - - psom:113275774 853.973