Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00949 ATGGATTCTTCTCCCTCTCGAGCTCAATCGTTCGGCCAAACAGAGATTAACTGGGATAAGCTTGACAAAACTAAGTTTTATGTCGTAGGAGCTGGCCTCTTTACTGGGGTTACCGTGGCCTTGTATCCAGTCTCTGTTGTAAAGACCAGGATGCAGGTTGCTACAAAAGATGCTGTGGAGAAAAATGCATTTTCTATTATTAGAGGCTTATTAAAAACAGAAGGGGTTCCTGGTTTGTACAGAGGGTTTGGCACAGTCATCACGGGTGCAGTTCCTGCCAGAATTATCTTCCTCACTGCTTTAGAGACTACAAAAGTGGCCACTATTAGGATAATTCAACCATTTAACTTGTCTGAACCAGCAGAGGCAGCCATAGGGAATGGGCTTGCTGGCATGATAGCATCACTGTTTTCTCAGGCTGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCTGGTCATGCAAAGTACAATGGAGGCCTAGATGTTGCTCGCAAAGTTCTGAAGTCTGATGGAATTCGGGGATTATATAGAGGATTTGGCCTATCAGTTATGACCTATTCTCCATCTAGTGCTGTATGGTGGGCGAGTTATGGTTCTAGCCAGCGCTTCATCTGGAGGTTCTTAGGCTATGGTAGCGAGCATAAGGAGCATGTTCCTAGCCAGGGGACAATAGTGTTAGTTCAAGCTACTGGAGGGATTGTAGCTGGTGCAATGGCATCCTGCATTACAACCCCATTGGACACCATTAAGACTCGATTACAGGTAATGGGACACGGAAAGAGAGATACTGCAAGAGAAGTTGTCAAAAGATTGATAGTGGATGATGGATGGAAAGGTTTATACAGAGGCTTGGGTCCAAGGTTTGTCAGCATGTCAGTATGGGGAACGTCAATGATAACATCCTACGAATATCTGAGTAAGGGACTCTTTCTCTTTACAAATATTCTAGTCTTATCTATTATTTCCATATGA 993 0.4381 MDSSPSRAQSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRMQVATKDAVEKNAFSIIRGLLKTEGVPGLYRGFGTVITGAVPARIIFLTALETTKVATIRIIQPFNLSEPAEAAIGNGLAGMIASLFSQAVFVPIDVVSQKLMVQGYSGHAKYNGGLDVARKVLKSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRFLGYGSEHKEHVPSQGTIVLVQATGGIVAGAMASCITTPLDTIKTRLQVMGHGKRDTAREVVKRLIVDDGWKGLYRGLGPRFVSMSVWGTSMITSYEYLSKGLFLFTNILVLSIISI* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00949 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Eupl11g00949 330 Gene3D Mitochondrial carrier domain 28 318 IPR023395 -
Eupl11g00949 330 Pfam Mitochondrial carrier protein 126 211 IPR018108 -
Eupl11g00949 330 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Eupl11g00949 330 Pfam Mitochondrial carrier protein 235 316 IPR018108 -
Eupl11g00949 330 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Eupl11g00949 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Eupl11g00949 330 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 314 - -
Eupl11g00949 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Eupl11g00949 330 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Eupl11g00949 330 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Eupl11g00949 330 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Eupl11g00949 330 FunFam Mitochondrial substrate carrier family protein 27 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00949 Eupl-Chr11 12164725 12177343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00949 16 314 Chloroplast and Mitochondria Gene Families AT5G15640 73.754 4.68e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00949 K15121 - nnu:104599601 535.028