Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00943 ATGGGTAGGAATGAATTTGTGGGTACCTTAGGAAGTGAGAGGGTTCCTCTCTTGAATCAGAGGGTGGACAGTAAAGGAAATGATGCGCAGTCGTCTAATGGTCCCTCGACAGACCTTGAGCATGGTGATGCTGTCCAGGCTACAAGTGTTGGATTTGGTAGAGTAATTCTACTGGCAAAGCCTGATTCAGGGAAATTGATCCTTGCTACTATCGCACTGTTGATAGCATCCACAACCAGTATTCTGATTCCCAAATTTGGTGGAAAGATAATAGACATCGTGTCTGGAGATATCGATACTCCTGAAAAGCAATCCGAAGCTTTGGATGCTGTCAAGAACACCATACTGTATATTGTGGTCATAGTTGTAACGGGTTCGATTTGCACAGCACTTCGGGCGTGGTTGTTTTCTTCTGCTAGTGAAAGGGTCGTTGCTCGACTGAGAAAGAACTTATTCAGTCACCTTATTTCCCAAGAAATAGCCTTCTTCGATGTTACTCGAACTGGGGAGCTCCTAAGTAGGCTATCTGAAGATACCCAGATCATAAAAAATGCTGCAACTACCAATCTATCTGAAGCCCTTCGAAATTTTTCCACCGCATTTATCGGTCTTGGCTTCATGTTTACAACATCGTGGAAATTAACATTGTTGGCTTTGGCTGTTGTGCCAGCTATTTCTGTTGCTGTACGTAAGTTTGGCCGTTACCTTCGCGAACTTTCCCATAAGACTCAAGCAGCAGCTGCGCTAGCTGCCTCAATTGCCGAGGAATCTTTTGGTGCAATACGCACAGTTAGATCTTTTGCTCAAGAGGATTATGAGATTTCACGCTACGCAGAGAAAGTAGATGACACCCTGAAGCTCGGACTGAAACAAGCTAAAGTAGTCGGCCTTTTCTCTGGAGGACTAAATGCAGCTTCGACATTATCAGTTATTGTAGTTGTAATATATGGCGCTAGCTTGACAATCACAGGTTCCATGACCACTGGTGCACTCACATCGTTCATTCTTTATAGCCTCACAGTTGGATCCTCAGTATCCGCTCTATCAGGGTTATATTCAGCAGCAATGAAAGCTACAGGGGCAAGTAGGCGGGTCTTTCAGCTTCTGGATCGCGTCTCATCCATGCCAAAATCTGGAAATAAGTGTCCTTTGGGTGATCAAGACGGAGATGTGGAGATAGATGATGTCTGGTTTTCCTATCCTTCTCGTCCTAATCATATGGTACTCAAGGGAATAACATTAAAACTGAGCCCTGGTTCAAAGGTTGCCCTTGTTGGTCCAAGTGGTGGTGGAAAAACCACAATAGCGAACTTAATCGAAAGGTTTTATGACCCTCAAAAGGGAAAGATTTTGGTAAATGGGGTCCCACTAGTAGAAATATCACATGAACATCTCCACAAAAAGATTAGTATTGTGAGCCAGGAGCCCGTTCTTTTCAACTGCTCCGTAGAAGAGAACATTGCATATGGGTTTGAAGGCAAAGCCAGCATTACCGATGTAGAAAATGCAGCTAAAATGGCTAATGCTCATGAATTCATATCAAAATTTCCGGAAAAATATCAAACCTATGTTGGAGAACGTGGGTTGAGGCTATCAGGAGGCCAGAAACAGAGAATAGCAATTGCGAGAGCACTGCTGATGAACCCCAGAATTCTACTCTTGGATGAAGCCACAAGCGCTCTGGATGCTGAGAGCGAATACCTTGTTCAGGATGCCCTGGATTCTCTGATGAAGGGTAGGACAGTTCTTGTTATAGCCCACAGGCTTTCAACTGTTAAAAGTGCAGACACAGTAGCTGTTGTATCTGATGGTCAGATAGTAGAAAGCGGCACTCATGAAGAGCTCCTCAGCAAGGACGGCGTCTATACTGCACTGGTGAAAAGGCAATTACAAGGACCCAGAACTGAACTCTAA 1914 0.4436 MGRNEFVGTLGSERVPLLNQRVDSKGNDAQSSNGPSTDLEHGDAVQATSVGFGRVILLAKPDSGKLILATIALLIASTTSILIPKFGGKIIDIVSGDIDTPEKQSEALDAVKNTILYIVVIVVTGSICTALRAWLFSSASERVVARLRKNLFSHLISQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNFSTAFIGLGFMFTTSWKLTLLALAVVPAISVAVRKFGRYLRELSHKTQAAAALAASIAEESFGAIRTVRSFAQEDYEISRYAEKVDDTLKLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGASLTITGSMTTGALTSFILYSLTVGSSVSALSGLYSAAMKATGASRRVFQLLDRVSSMPKSGNKCPLGDQDGDVEIDDVWFSYPSRPNHMVLKGITLKLSPGSKVALVGPSGGGKTTIANLIERFYDPQKGKILVNGVPLVEISHEHLHKKISIVSQEPVLFNCSVEENIAYGFEGKASITDVENAAKMANAHEFISKFPEKYQTYVGERGLRLSGGQKQRIAIARALLMNPRILLLDEATSALDAESEYLVQDALDSLMKGRTVLVIAHRLSTVKSADTVAVVSDGQIVESGTHEELLSKDGVYTALVKRQLQGPRTEL* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00943 637 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 67 357 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00943 637 Gene3D ABC transporter type 1, transmembrane domain 116 388 IPR036640 GO:0005524|GO:0016020
Eupl11g00943 637 SUPERFAMILY ABC transporter transmembrane region 57 370 IPR036640 GO:0005524|GO:0016020
Eupl11g00943 637 MobiDBLite consensus disorder prediction 22 41 - -
Eupl11g00943 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 391 628 IPR003439 GO:0005524
Eupl11g00943 637 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 33 632 IPR039421 -
Eupl11g00943 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 629 IPR027417 -
Eupl11g00943 637 FunFam ABC transporter B family member 25 389 631 - -
Eupl11g00943 637 ProSitePatterns ABC transporters family signature. 531 545 IPR017871 GO:0005524|GO:0016887
Eupl11g00943 637 CDD ABC_6TM_AtABCB27_like 69 365 - -
Eupl11g00943 637 FunFam ABC transporter B family member 25 118 388 - -
Eupl11g00943 637 Pfam ABC transporter transmembrane region 66 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl11g00943 637 Pfam ABC transporter 409 559 IPR003439 GO:0005524
Eupl11g00943 637 CDD ABC_MTABC3_MDL1_MDL2 391 629 - -
Eupl11g00943 637 PIRSF ABC_prm/ATPase_B 11 637 - -
Eupl11g00943 637 MobiDBLite consensus disorder prediction 23 41 - -
Eupl11g00943 637 Gene3D - 389 630 IPR027417 -
Eupl11g00943 637 SMART AAA_5 418 612 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00943 Eupl-Chr11 12054334 12063537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00943 82 629 Calmodulin-binding Proteins AT2G36910 38.087 9.14e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00943 - - nnu:104597910 1056.97