Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00931 ATGGAGTGGAAAGGGGGGGAAATTGTTTTACCAGTTAACCCCATAAAAGTTCACCATCCAATCCCATCTGTAGAGGATCTCAAAGCAGCTCTACAAAGAAGGGGTCCTGATCACTTGGGAAGCAAGAAGGTATTCCTTCAGTTAAAGACTTCAAGCTATGTTGAGAAAGAAGAAATTGTAACTCTTTTCAATGTGAAAGAGCTAAACAAAATGGTGGAGTCCTGTTTCTGCTTTTCCAAAACAAAAAATGATTGCATTTGCTTCAACTCTGCAAATGAAGTGGTGCAAGATGATGGTTTCATTGCAATCAAATCTGTTGCAGAACTGCACTTTGTTGGTGCCACATTGCAACTTAGGGGAATAACTCCTGTTTTTCAGCCATTGGTGGATGCTTCTGGAAATATCCTTGTTTATAATGGTGAAATATTTGGGGGGATTCATGTTGATAGTGATAGCAACGATACTGAAGCTCTCATGCATGCTCTGGGAAGGTGCTGCTCCTGCAACTTCCATGGACATAAAAGACTATGTGATCGCATTGAAAAAGGGCAAAGTTCTGTGGTGGAGCTTCTTTCAACAATTAAAGGGCCATGGGCATTAATCTATTGGCAGAATAGCTCAAAGACCATGTGGTTTGGTCGAGATGCATTTGGAAGGCGCAGCCTCCTTGTTCACTGGCCGACTTTGGAGGACTCTCGGCTTCTGCTCTCTTCTGTATCGCCACCTTCATCCTTCAAAAAGAATTCTGATTCTGAAGTTGAAGATTGGATGTGTGACCTCAATTTCTGGGAGGAGCTTTCTTGTGGGATATACAGCATATGCTTGGATGCTTCAAAACTCAATGGATGTCTGGTTGGTGAAGTCAGAAAACATGAATGGACTGATCCTGTGCTAAAAGAACTGATCAAATGGGAGAGAGATTATGTGGAACCCAAGTCTGAGGAACTGTATTTCCCCAATGTTTCGGTTGCAAGGGAGCAACATGTCATGCATTCAAGTTGTGCAGATGGAATGCCTTACAAATTAGGGGTTATTCGACCTTCAGTTTCGCTGCCAGCACATAAGGTGCTCATTGCTCTCAGAGAGTCTGTGATGTGGCGTAGTACTTTAAACACAGTCTTTCAGACAACAATGCGTGAAACTAGACAAGAGAAACATGTTCCAGTGGCGGTCCTTTTCTCAGGAGGATTGGACTCAATGATACTTGCAGCATTATTGGACGAGTGCGTGGATCCCAGCTATGATATCGATCTGCTTAATGTAAGCTTTGATGGCCAGTCTGCTCCAGATAGAATCTCCGCGAGGGCAGGAGTAAAGGAACTTCAAAGAATTGCATCTTCAAGAAGGTGGAACCTTGTGGAGATTGATGCTGATTTGTCGAATTTGACCTCTGAAACCAAGCACGTCATGTCTCTCATAAATCCTTCAAAGACCTACATGGATCTGAATATTGGGATAGCATTATGGTTGGCAGCTGGTGGTGATGGTTGGCTGAATGAAGGGATTTCAAATAACAGTGAAGAGGATCATCGGCGTTTGAAGTACAAGTCTGAGGCCAAAATTCTCCTAGTTGGTTCTGGTGCTGATGAGCAATGTGCTGGCTACAGTAGGCATAAAACAAAATATAGACTGGGAGGTTGGCTTGGGCTGCATGAGGAAATGCAATTGGACATGCAGAGAATTTGGAAAAGAAACCTAGGGAGAGACGACAGATGCATTTCCGACAATGGAAAGGAGGCTAGATTTCCATTCTTGGATGAGGATGTTATCAGGACTCTTCTAGAAATCCCTCTATGGGAGATTGCTGACCTTGATCAGCCAATTGGAATAGGTGATAAGAAGATTCTGAGAGAGGTTGCGCAATTGCTGGGCTTGGAAGCAGCAGCATTTCTGCCCAAGAGAGCAATCCAGTTTGGTTCCAGAATAGCAAGAGAGTCGAATCGAAAGAATTTTGGGAGTAATCGTGCAGCAAATCAGGCATCCGCAGGGAGTGTTGTTTTGAGGGTCTTTGGGGAGTTTTCGGATTTTAAGGTTTCAATGGAAAGTAGTAGCAGTAGCAACAAGCCCAGTCAGTGGAGAGCAGAGGAAGCCGTTGCTGGCAACGCCGAAGCTCTTGAAGCTCTTAGAGAACTCATCACATTCCCTATCCAGTATTCTGTGGAGTCTCAAAAGCTCGGCCTCAAATGGGGCAGAGGATTGCTGCTGTACGGTCCCCCAGGCACCGGCAAGACAAGCTTGGTCCGCGCTGTTGTTCGAGAATGTGATGCGCATTTGATTGTGATTAGTCCACATTCTGTTCATAGAGCACATGCGGGAGAAAGTGAGAGAATTTTGCGAGAAGCTTTTGCAGAAGCATCAACTCAGGCATCATTGGGCAAGCCATCCGTTATCTTTATCGACGAAATTGATGCTCTTTGTCCTCGTCGTGATTCAAGGAGAGAGCAAGACATTCGCATAGCTTCACAACTCTTTACACTGATGGATGCCAACAAACCTTCGTCAACATCTCCTTCACAAGTTGTTGTTGTGGCATCAACAAACAGAGCGGATGCGATTGATCCAGCATTACGAAGATCAGGACGTTTTGATGTGGAAGTCGAAGTTACAACACCTACTGAAGAGGAGCGCTTTCAAATCCTCAATCTCTACTCAAAGAAGCTTCCTTTGGAACCCAGTGTCAACCTACAAGCTGTAGCTGCATCTTGCAATGGATATGTTGGGGCTGATTTAGAAGCTTTATGTCGGGAGGCTACAATGTCTGCAGTACGGAGATCCTCAAATATAACTGAAGACTCTGGTATATTTAGCTTAACAATGGATGACTGGAAGCATGCAAGATCTGTGGTTGGTCCAAGCATTACAAGAGGTGTTACTGTAGAAGTCCCCAAGGTGTCATGGGAAGATATTGGAGGATTAAAAGATTTGAAGAAAAAGCTTCAGCAAGCGGTTGAGTGGCCCATTAAGCATGCTGCTGCATTTGCAAGGCTGGGGATATCACCAGTACGCGGGGTCCTTTTACATGGACCACCAGGGTGCTCAAAGACTACCCTTGCCAAAGCTGCAGCTCATGCTGCCCAAGCTTCTCTTTTTTCCTTGAGTGGTGCAGAGTTGTATTCGATGTATGTTGGAGAAGGAGAAGCATTGTTGCGTAATACATTTCAGAGAGCTCGCCTAGCAGCACCAAGTATAATATTCTTTGATGAGGCTGATGTAGTTGCTGCCAAACGAGGCGGGAGTTCAAGCAGCAACGTTACAGTCGGAGAGAGACTGCTATCTACCTTGCTTACTGAAATGGATGGGTTGGAGCAAGCTAAGGGAATTCTTGTTTTGGCTGCTACAAATCGTCCTCATGCTATTGACGCTGCACTTATGCGTCCTGGTCGCTTTGACTTGGTGCTTTATGTACCACCACCTGATTTAGAAGCTCGCTATGAGATATTGCGTGTGCATACACGTAATATGAAGGTAGGGGATGATGTGGATCTCAGAGATATAGCACAAGATACTGATCTGTTCACAGGGGCTGAACTGGAAGGTCTCTGTAGGGAAGCTGGTATGGTAGCTCTTAGGGAAGACATCTCTGCCGCCCATGTCTATGACCGTCATTTCCGAACTGTAAGGGATTCATTGAAGCCAGCATTAACCAGACAGGAAATTGATGCATACGCCTCATTTATGAAGAATCCATCGTTGAGGTCGTCTGATCAGTCTGTATTGAGCACCAAACAGAACAGATATTTTCCAATCCAAAAGTGGATCCTCGCGCCCGAGATCACTGATTCCTAA 3786 0.4496 MEWKGGEIVLPVNPIKVHHPIPSVEDLKAALQRRGPDHLGSKKVFLQLKTSSYVEKEEIVTLFNVKELNKMVESCFCFSKTKNDCICFNSANEVVQDDGFIAIKSVAELHFVGATLQLRGITPVFQPLVDASGNILVYNGEIFGGIHVDSDSNDTEALMHALGRCCSCNFHGHKRLCDRIEKGQSSVVELLSTIKGPWALIYWQNSSKTMWFGRDAFGRRSLLVHWPTLEDSRLLLSSVSPPSSFKKNSDSEVEDWMCDLNFWEELSCGIYSICLDASKLNGCLVGEVRKHEWTDPVLKELIKWERDYVEPKSEELYFPNVSVAREQHVMHSSCADGMPYKLGVIRPSVSLPAHKVLIALRESVMWRSTLNTVFQTTMRETRQEKHVPVAVLFSGGLDSMILAALLDECVDPSYDIDLLNVSFDGQSAPDRISARAGVKELQRIASSRRWNLVEIDADLSNLTSETKHVMSLINPSKTYMDLNIGIALWLAAGGDGWLNEGISNNSEEDHRRLKYKSEAKILLVGSGADEQCAGYSRHKTKYRLGGWLGLHEEMQLDMQRIWKRNLGRDDRCISDNGKEARFPFLDEDVIRTLLEIPLWEIADLDQPIGIGDKKILREVAQLLGLEAAAFLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVLRVFGEFSDFKVSMESSSSSNKPSQWRAEEAVAGNAEALEALRELITFPIQYSVESQKLGLKWGRGLLLYGPPGTGKTSLVRAVVRECDAHLIVISPHSVHRAHAGESERILREAFAEASTQASLGKPSVIFIDEIDALCPRRDSRREQDIRIASQLFTLMDANKPSSTSPSQVVVVASTNRADAIDPALRRSGRFDVEVEVTTPTEEERFQILNLYSKKLPLEPSVNLQAVAASCNGYVGADLEALCREATMSAVRRSSNITEDSGIFSLTMDDWKHARSVVGPSITRGVTVEVPKVSWEDIGGLKDLKKKLQQAVEWPIKHAAAFARLGISPVRGVLLHGPPGCSKTTLAKAAAHAAQASLFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVAAKRGGSSSSNVTVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARYEILRVHTRNMKVGDDVDLRDIAQDTDLFTGAELEGLCREAGMVALREDISAAHVYDRHFRTVRDSLKPALTRQEIDAYASFMKNPSLRSSDQSVLSTKQNRYFPIQKWILAPEITDS* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00931 1261 ProSitePatterns AAA-protein family signature. 1107 1125 IPR003960 GO:0005524|GO:0016887
Eupl11g00931 1261 CDD RecA-like_CDC48_NLV2_r1-like 697 868 - -
Eupl11g00931 1261 FunFam spermatogenesis-associated protein 5-like protein 1 1138 1224 - -
Eupl11g00931 1261 Pfam Glutamine amidotransferase domain 126 238 IPR017932 -
Eupl11g00931 1261 FunFam Cell division control protein 48 homolog B 871 953 - -
Eupl11g00931 1261 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 18 255 IPR029055 -
Eupl11g00931 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 953 IPR027417 -
Eupl11g00931 1261 CDD Asn_Synthase_B_C 386 639 IPR001962 GO:0004066|GO:0006529
Eupl11g00931 1261 Gene3D HUPs 363 667 IPR014729 -
Eupl11g00931 1261 Gene3D - 954 1138 IPR027417 -
Eupl11g00931 1261 Gene3D - 871 953 - -
Eupl11g00931 1261 Gene3D - 680 869 IPR027417 -
Eupl11g00931 1261 Gene3D - 1139 1219 - -
Eupl11g00931 1261 Pfam AAA+ lid domain 892 927 IPR041569 -
Eupl11g00931 1261 Pfam AAA+ lid domain 1159 1204 IPR041569 -
Eupl11g00931 1261 Pfam ATPase family associated with various cellular activities (AAA) 1004 1136 IPR003959 GO:0005524|GO:0016887
Eupl11g00931 1261 Pfam ATPase family associated with various cellular activities (AAA) 733 868 IPR003959 GO:0005524|GO:0016887
Eupl11g00931 1261 SMART AAA_5 1000 1139 IPR003593 GO:0016887
Eupl11g00931 1261 SMART AAA_5 729 872 IPR003593 GO:0016887
Eupl11g00931 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 962 1222 IPR027417 -
Eupl11g00931 1261 CDD RecA-like_CDC48_r2-like 975 1135 - -
Eupl11g00931 1261 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 23 238 IPR029055 -
Eupl11g00931 1261 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 23 659 - -
Eupl11g00931 1261 Pfam Asparagine synthase 382 441 IPR001962 GO:0004066|GO:0006529
Eupl11g00931 1261 Pfam Asparagine synthase 516 621 IPR001962 GO:0004066|GO:0006529
Eupl11g00931 1261 FunFam Cell division control protein 48 homolog B 690 869 - -
Eupl11g00931 1261 FunFam Cell division control protein 48-B-like protein 954 1138 - -
Eupl11g00931 1261 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 376 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00931 Eupl-Chr11 11894184 11923369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00931 658 952 Calmodulin-binding Proteins AT3G56690 32.381 3.56e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00931 - - nnu:104597928 934.865