Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00930 ATGACCACCAATTCAAGAGAAAAGGATTTTCAAGCAAAGCAGGAATTCAACACCAATGAAGGCAAGATCACTAAGGGCTCATCTAGTTCAAGACCATGGTCAGGGCTAAAAGATCCACGAATTGTACGTGTCTCGCGTTCTTTTGGAGGAAAAGATAGACATAGCAAAGTTTGCACAATAAGAGGATTGAGAGACAGGCGTGTCAGGCTTTCAGTACCCACTGCTATTCAGTTGTATGACCTTCAAGATAGGCTTGGGTTTAATCAACCTAGCAAGGTTGTGGATTGGCTGCTAAATGCTACGAGACATGAAATTGATGAACTTCCTCCGCTGCCACCGGGAAGCTTTGATCAATACCCTCAAACTATGACAGTTTCTCATGAAGTGAGTGCACCCCAATCTTCCCTTTCTTCTTTTGTAGATGCAAATACAGAATATGTAAAGGATGATGGATCTCACACTTTTACATCTAGTAAGGGAGGGTTTAATATCATTAACAATGTTGTTGGGGAAGATCAAACAACATTTCCCAAATCTACATATTGGAATTCAGATGCTACTTTTAGGTCTACGAGTAAAGAAGTTGCAAGAGAAACAATCACTGAGAAAAGCAATTGGATCAAAAGAAATGAACACGAAAGGCAAGAAGGCGTTGAAGTTCATAGTGCGAATGCGTCAGTTCACAGCCCTCTTCCTAGAGCAAGTCATTCTTCACTACCAGGCTCGCTAAACAGTGTCATTCCATACAATTCCTACTATCATTGGGAGCCTTCAAACTTATCTTTATCCCATTTAGGAAGCCATGGATATTTGTCCCAAACAGAAGATCCCCACAACTATAACGTTGTATCGATGCCATCCTCATTGTCTCTACCATCTGGGTCTCAGCTATTGGTATGTCCATCTATAACAACACCATCCTTCTTTCCTCCATATGTTACAACGACCCCAATAGAGTACGATCCGAGACAAATCAACCACTTTCAAATGCTGAGTTCGAGTTCACAAAATCTTTTTCCGAGTTCTCTTGCACCATCTTTTTACTCAATAAGCCCACCTGTGAGACCCTTCCAGTTGATAACTCCTAAACCTCTTCCTTCTCAAAACAACAATGGAAATCAACCAAATAAAGGAAACAATGGCTCTTCTAGTCCTTTCACTTAA 1164 0.4098 MTTNSREKDFQAKQEFNTNEGKITKGSSSSRPWSGLKDPRIVRVSRSFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGFNQPSKVVDWLLNATRHEIDELPPLPPGSFDQYPQTMTVSHEVSAPQSSLSSFVDANTEYVKDDGSHTFTSSKGGFNIINNVVGEDQTTFPKSTYWNSDATFRSTSKEVARETITEKSNWIKRNEHERQEGVEVHSANASVHSPLPRASHSSLPGSLNSVIPYNSYYHWEPSNLSLSHLGSHGYLSQTEDPHNYNVVSMPSSLSLPSGSQLLVCPSITTPSFFPPYVTTTPIEYDPRQINHFQMLSSSSQNLFPSSLAPSFYSISPPVRPFQLITPKPLPSQNNNGNQPNKGNNGSSSPFT* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00930 387 MobiDBLite consensus disorder prediction 1 15 - -
Eupl11g00930 387 MobiDBLite consensus disorder prediction 1 36 - -
Eupl11g00930 387 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 325 IPR005333 GO:0003700
Eupl11g00930 387 Pfam TCP family transcription factor 50 206 IPR017887 -
Eupl11g00930 387 MobiDBLite consensus disorder prediction 16 34 - -
Eupl11g00930 387 MobiDBLite consensus disorder prediction 362 387 - -
Eupl11g00930 387 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Eupl11g00930 387 MobiDBLite consensus disorder prediction 359 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00930 Eupl-Chr11 11886040 11888563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00930 2 112 TCP Transcription Factor Family AT3G02150 65.833 2.91e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl11g00930 TCP 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00930 - - nnu:104597931 456.447