Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00921 ATGGCTTTCGCTAGTAAAGTCGGGAATCTAATTAAGCAGAGTGTAAGCAAGCACATCAATTCGGAACTGTCTGCTTCCAATCCATCAATATTCCAAGCAATTAGATGCATGTCTTCTGCCAAACTTTTCATTGGAGGTCTCTCATATGGCACGGACGACACAAGTCTGAGAGAAGCTTTTGTTGACTATGGGGAAGTTATTGAAGCAAGGGTTATCATGGATCGTGAGACGGGTAGATCCAGAGGCTTCGGTTTTGTTAGTTTCACATCTACTGAGGAGGCCTCCAAAGCTATCCAGGCCATGGATGGACAGGATCTTCACGGCAGAAGGGTAAGGGTGAATTATGCAACGGATCGTACAGGAGGATTCCGTGGTGGCTATGGAGGTGGTGGCTATGGTGGTGGTGGCTATGGTGGTGGTGATAGCTACGGAAGTGGAGGGAGCGGTTATGGTGGAAGCGGAGGTGGTGGTTATGGTGGTGATAATTATGGAAGTGGAGGTAGTGGCTATGGTGGAAGCAGTGGTGGTGGAGGTTATGTGGGCGGAAGTGGTTATGGTGGTGGAAGCAGTGGTAGTGGTAGTGGTAGTGGTAGTGGTAGTGGTGGTGGCAGAGGTGGTTATGATGGTGGAAGCAGCACTGGAAGTTTTGGTGTTGCCGGTGGTGGTGGTGGCAGTGACAACTATGTTAGAAGTGGTGCTGGTGGTGACAGCAGCTATGCAAGTGGCGGCTATGGTGGAAGGATGGGAGCATCATATGGAAGCAGCAATCAATACAGCGGTGGCCAAGGTAGCAGCATGGATTCAGGAGGACACGGCCAGGATGATCCATTGGAAGGGAATTACAGGGACGACGACGATGAGCCTGACGACTATGCCAACAAGAGGGGTTGA 891 0.5062 MAFASKVGNLIKQSVSKHINSELSASNPSIFQAIRCMSSAKLFIGGLSYGTDDTSLREAFVDYGEVIEARVIMDRETGRSRGFGFVSFTSTEEASKAIQAMDGQDLHGRRVRVNYATDRTGGFRGGYGGGGYGGGGYGGGDSYGSGGSGYGGSGGGGYGGDNYGSGGSGYGGSSGGGGYVGGSGYGGGSSGSGSGSGSGSGGGRGGYDGGSSTGSFGVAGGGGGSDNYVRSGAGGDSSYASGGYGGRMGASYGSSNQYSGGQGSSMDSGGHGQDDPLEGNYRDDDDEPDDYANKRG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00921 296 PRINTS Eggshell protein signature 45 56 - -
Eupl11g00921 296 PRINTS Eggshell protein signature 195 213 - -
Eupl11g00921 296 PRINTS Eggshell protein signature 127 142 - -
Eupl11g00921 296 PRINTS Eggshell protein signature 158 168 - -
Eupl11g00921 296 SMART rrm1_1 41 114 IPR000504 GO:0003723
Eupl11g00921 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Eupl11g00921 296 Gene3D - 11 138 IPR012677 -
Eupl11g00921 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Eupl11g00921 296 MobiDBLite consensus disorder prediction 250 269 - -
Eupl11g00921 296 MobiDBLite consensus disorder prediction 187 296 - -
Eupl11g00921 296 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 21 201 - -
Eupl11g00921 296 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 12 141 - -
Eupl11g00921 296 SUPERFAMILY RNA-binding domain, RBD 28 132 IPR035979 GO:0003676
Eupl11g00921 296 CDD RRM2_NsCP33_like 41 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00921 Eupl-Chr11 11762010 11767162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00921 38 192 Eukaryotic Initiation Factors Gene Family AT4G34110 28.125 9.50e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00921 K12741 - nnu:104599234 201.06