Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00915 ATGAAGAGTGTTAAGAACATTCAGAAAGCCATGAAAATGGTTGCAGCCTCGAAGCTACAAGCAATTCAAGTTAGAGCTGAAAATTCACGTGGCTTGTGGCAGCCATTCACCGCACTTCTTGGAGATACTCCTAGTGTTGACGTTAAGAAGAACACTATTGTCACTATTTCCTCTGACAAGGGTCTTTGTGGTGGAATCAATTCTACATCAAAGCAAGGCTTTTTACAAATTGGTGTCCTTTTTACAATTTCAATGCCGATCTATTTATTGCTTTCAGGTCCCGATAAAGAAACAAAATATGTCGTTTTGGGGGAAAAGGCAAAGGCTCAACTTGTGCGCGACTCAAAGAAGGACATTGAGAGATCCATAACCGAGTTGCAGAAGAATCCTCTGAATTATACTCAGGTTTCTGTTCTCGCAGATGACATCTTAAAGAATGTTGAGTATGATGCTTTGAGAATTGTTTTCAACAAGTTCCAATCAGTTGTCTCATTTATGCCAACAGTGGCTACTGTATTATCTCCTGAGGTTGTTGAGAAAGAGGCTGAAGCCGGTGGGACGCTTGGTGATTTGGACTCCTATGAAATCGAAGGTGGTGAAACAAAAGCAGAAGTGCTTCAGAATCTAGCAGAGTTCCAGTTTTCTTGTAATGCATGCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGTTCCAGTAGAAATGCTGGAGAGATGCTTGATCGTCTCACGCTTACTTATAACAGAACTCGTCAAGCAACGATCACCACAGAACTGATTGAGATTATATCTGGAGCTTCAGCACTAACCGGCTAA 816 0.4203 MKSVKNIQKAMKMVAASKLQAIQVRAENSRGLWQPFTALLGDTPSVDVKKNTIVTISSDKGLCGGINSTSKQGFLQIGVLFTISMPIYLLLSGPDKETKYVVLGEKAKAQLVRDSKKDIERSITELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFQSVVSFMPTVATVLSPEVVEKEAEAGGTLGDLDSYEIEGGETKAEVLQNLAEFQFSCNACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQATITTELIEIISGASALTG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00915 271 Coils Coil 109 129 - -
Eupl11g00915 271 Pfam ATP synthase 2 269 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 PANTHER ATP SYNTHASE GAMMA CHAIN 2 269 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 2 269 IPR035968 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 Gene3D ATP synthase, gamma subunit, helix hairpin domain 2 266 - -
Eupl11g00915 271 ProSitePatterns ATP synthase gamma subunit signature. 255 268 IPR023632 -
Eupl11g00915 271 PRINTS ATP synthase gamma subunit signature 150 167 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 PRINTS ATP synthase gamma subunit signature 48 67 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 PRINTS ATP synthase gamma subunit signature 247 268 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 PRINTS ATP synthase gamma subunit signature 216 235 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 FunFam ATP synthase gamma chain 223 266 - -
Eupl11g00915 271 Gene3D - 14 228 - -
Eupl11g00915 271 NCBIfam ATP synthase F1 subunit gamma 2 269 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 CDD F1-ATPase_gamma 1 266 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl11g00915 271 FunFam ATP synthase subunit gamma 14 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00915 Eupl-Chr11 11697181 11707666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00915 1 269 Primary Pumps ATPases AT1G15700 27.273 3.33e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00915 K02136 - nnu:104611718 442.195