Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00890 ATGGGGTGCTGTAACAGCAAAAACGGAGATTTAAGCGGAAGTTGGCTCTCTCGATGGAGATCGACCAGCATTGTCTCTCCAAGAGACTGCAAATTGGAGGGGCCTACCCAGAGCCAATCCGCTTTTGTCTGTCCTCCTGGGTATTGGTTTTGCCCTCGCGAAAGGGAACTTATAATCTACTATCTCAAGAATAAGATACTTGGCCTTCCTCTCCCCATTGATATAATCAAGGACTTTAAAGTCTACCAGTGCAACCCTGATCAGCTACCCCGTGATTTCAAGTTCGGGAAGGGGAATGAACTGTATTTCTTCACACCCAGGGATCTTCGACACACGAATGGAGATCGTCCCAATCGCACTTCTAGATACGATTATCGGAAGGCAACTTGTAAGGCGACGAATGTTGAAGACGGTCATGGCAGAGTCGTTGGGAGTAGGAGGACGTTGATGGACTTTGTTCCATGTAAGATTTTCGAGAGGCATTCCAGCTCTACTAATTCTGGTAAAGCTCTCGAGGCCTTGCCAATTGAACATGAAAGCGCAGAAACCTCGAACCGAGAAATTTCATCAACGTCAAATTCCAATTTAGGAGATGCAGGAATACAAGCTACTCCTTGCTACCATCCACCGGATCAAGGGAATATCAGCGACATGTTCTCAACACAAGTGACCAGCAGGCAGCAACACCATTCAGTGCCCAACTGA 705 0.4709 MGCCNSKNGDLSGSWLSRWRSTSIVSPRDCKLEGPTQSQSAFVCPPGYWFCPRERELIIYYLKNKILGLPLPIDIIKDFKVYQCNPDQLPRDFKFGKGNELYFFTPRDLRHTNGDRPNRTSRYDYRKATCKATNVEDGHGRVVGSRRTLMDFVPCKIFERHSSSTNSGKALEALPIEHESAETSNREISSTSNSNLGDAGIQATPCYHPPDQGNISDMFSTQVTSRQQHHSVPN* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00890 234 PANTHER NAC TRANSCRIPTION FACTOR 56 44 153 - -
Eupl11g00890 234 MobiDBLite consensus disorder prediction 177 216 - -
Eupl11g00890 234 SUPERFAMILY NAC domain 39 150 IPR036093 GO:0003677|GO:0006355
Eupl11g00890 234 Gene3D NAC domain 54 167 IPR036093 GO:0003677|GO:0006355
Eupl11g00890 234 ProSiteProfiles NAC domain profile. 44 194 IPR003441 GO:0003677|GO:0006355
Eupl11g00890 234 Pfam No apical meristem (NAM) protein 45 150 IPR003441 GO:0003677|GO:0006355
Eupl11g00890 234 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00890 Eupl-Chr11 11376815 11381993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00890 44 150 NAC Transcription Factor Family AT1G69490 41.121 5.25e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl11g00890 NAM 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00890 - - msin:131245250 108.612