Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00885 ATGGATGATGAGAAGAAACCTGAATTGGGAACAGATATTTCTGGTGACTCAAGCTGGTTTGAAACCGGTAACTTCTTCAGCAGTGACCGGGAAAGCAGTATCTTGAGCGAATTCGGGTGGAATTTGCAGCAGAAAAACGACCGGAACAGCGCGATTAGTGATTTTCCAGCGTTTGATCCGTTCGATGTGGACCAGGAGTCAGACTTGGCGGGAAGCTTTCAGTTCCCGGTAAACCGCTCTTCGTTATGTTTAAACCAGATGGTTCCGACGGGATCAGTCGATAAATCCGGCGATGCTTCGACGTCGAATCTGTCTGTGTGTTCGAGCTCGAGCGACGAGCTGCCGGAAAAATCGACGCGATCTGACGGAAAACCGCCTGATAAACCGAGTAAAAGTAGAAAGAAAGGTGAAAAGCGTACTAGACAGCCACGGTTTGCATTCATGACTAAGAGTGAAGTCGATCATCTTGAAGATGGCTACCGGTGGAGGAAATACGGACAGAAGGCCGTTAAGAATAGTCCACACCCTAGGAGCTATTATCGCTGTACAAACAGCAAATGCACAGTGAAGAAGAGGGTCGAAAGGTCCTCCGCAGATCCCACTATTGTAATCACCACATACGAAGGCCAACACTGTCACCACAGTGCCGGCTTTCCACGTGGTAGTGTCTTTTCTCACGAGGCAGCATATGCAGGCCGGCTGACCACATCAGGCTCACAGTTATATCTTCCAGGGGTGCACTTCCCTTTAGGAGGTTCACTCGATATCAGGCAAGTACCTCACCGACCCCAACGTGAAATAAGGTCAGCCCAAGTGCTGGCTGAGCCATCCATGCAGATTCCAACTGATGAAGGACTGCTCGATGACATTGTGCCTGCCGCAATGCGTAGCAGATGA 897 0.4983 MDDEKKPELGTDISGDSSWFETGNFFSSDRESSILSEFGWNLQQKNDRNSAISDFPAFDPFDVDQESDLAGSFQFPVNRSSLCLNQMVPTGSVDKSGDASTSNLSVCSSSSDELPEKSTRSDGKPPDKPSKSRKKGEKRTRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPHPRSYYRCTNSKCTVKKRVERSSADPTIVITTYEGQHCHHSAGFPRGSVFSHEAAYAGRLTTSGSQLYLPGVHFPLGGSLDIRQVPHRPQREIRSAQVLAEPSMQIPTDEGLLDDIVPAAMRSR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00885 298 SUPERFAMILY WRKY DNA-binding domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl11g00885 298 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00885 298 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00885 298 Gene3D WRKY domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl11g00885 298 MobiDBLite consensus disorder prediction 115 133 - -
Eupl11g00885 298 MobiDBLite consensus disorder prediction 92 146 - -
Eupl11g00885 298 MobiDBLite consensus disorder prediction 92 114 - -
Eupl11g00885 298 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 105 220 IPR044810 GO:0003700
Eupl11g00885 298 FunFam WRKY transcription factor 57 142 216 - -
Eupl11g00885 298 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00885 Eupl-Chr11 11325890 11330357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00885 1 297 WRKY Transcription Factor Family AT1G69310 45.307 4.19e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl11g00885 WRKY 7.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00885 - - nnu:104597986 349.362