Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00866 ATGAGTCACTGTGTAGTACCCAACTGGAATCTGATACACCAAAGACAAGAACAAGGAGGAGGAGAAGAAGGAAACAGATCCTCTCACGTGCACATCCAACAACCTAATATTCTTGTCCCCATGTCGTCGGATTATGAAGTTGCAGAGCTGACATGGGAGAACGGCCAGCTAGCCATGCATGGGCTTGGTGGGCTTGTTCCCACCACTCCGGCAAAGTCTTCATGGGTTCGGGCAGGCGGCACACTAGAGTCTGTCGTCCACCAGGCCACTTGCCACAAAGAAAATTCGAATCTGGTTGAATATGACCCGAATCCGGCAAATATCAACTCCGTTGTTGCATCTTCTGGCGGAAAATGGGCCGAAAATACTAGCGAGGTCCAAACCGGCCCAGAGTTAATGAAGAAGCGATCGAGGTCTGAGACCCGGCCCAATAGAAGACATTGTAGTAGTAATGTTCGAGAAGAGCGTGCGGATCGTAGTGCATGTGCTAGTGCTAGTGCAACTTTTTGCCGTGAGACCGATACTACTATGATGACGTGGACGTCACTCGAATCTCCCCACAGCTTGAAGACGAAGACGACTGACGAGGACTCAGCCTGCCGCGGGGAACAGGAAAACCCAGATGAAGAACTGGAGACCAAAGCTGAAACTGGCCGTTTTCATTCGTCTAGGAGAAGTCGAGCCGCCGCTGTTCATAATCAATCAGAACGGAGGCGCCGGGATAGGATCAATCAGAAGATGAAAACTTTGCAGAAGTTGGTACCCAATTCAAGTAAGACAGATAAAGCTTCAATGCTGGATGAAGTGATTGAATACTTGAAACAGCTTCAAGCCCAAGTTCAGATGATGAGTGTTAGGAATATGCCTCAGATGATGATGCCTCTAGGGATGCAACAACATCTCCAAATGTCTCTCCTAGCACGCATGGGCATGGGCATGGGACTTGGGATGGGGATGGGAATGTTGGACATGAGCACCGTTGCGCGCGCTGCCCCTCAACCAATTCCTCCTCTTCTTCACCCCACTTCGGTTGCCGCCGGTGCAACTCCTACATTTGTTCCACCTCAATTCATCATTCCTCCTATGATGCCGACACGCACGACTGCATCCGCGAATTCAGATCATGCTGCCAAACCTCAGATTCCAATGCCCGACCCCTATTGCGCGTTTCTAACACAACAATCTATGAATATAGATCTCTACAACAAGATGGCGGCGCTATATCAGCAACAAGTCAATCAGACTGCACTGGCAACAACTACTTCAGCGGCGAACCGTCCGACGTGA 1287 0.4996 MSHCVVPNWNLIHQRQEQGGGEEGNRSSHVHIQQPNILVPMSSDYEVAELTWENGQLAMHGLGGLVPTTPAKSSWVRAGGTLESVVHQATCHKENSNLVEYDPNPANINSVVASSGGKWAENTSEVQTGPELMKKRSRSETRPNRRHCSSNVREERADRSACASASATFCRETDTTMMTWTSLESPHSLKTKTTDEDSACRGEQENPDEELETKAETGRFHSSRRSRAAAVHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSVRNMPQMMMPLGMQQHLQMSLLARMGMGMGLGMGMGMLDMSTVARAAPQPIPPLLHPTSVAAGATPTFVPPQFIIPPMMPTRTTASANSDHAAKPQIPMPDPYCAFLTQQSMNIDLYNKMAALYQQQVNQTALATTTSAANRPT* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00866 428 Gene3D - 222 287 IPR036638 GO:0046983
Eupl11g00866 428 MobiDBLite consensus disorder prediction 184 241 - -
Eupl11g00866 428 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 224 288 IPR036638 GO:0046983
Eupl11g00866 428 Pfam Helix-loop-helix DNA-binding domain 231 277 IPR011598 GO:0046983
Eupl11g00866 428 CDD bHLH_AtPIF_like 227 289 IPR047265 -
Eupl11g00866 428 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 47 419 IPR031066 -
Eupl11g00866 428 MobiDBLite consensus disorder prediction 131 159 - -
Eupl11g00866 428 MobiDBLite consensus disorder prediction 189 223 - -
Eupl11g00866 428 MobiDBLite consensus disorder prediction 119 159 - -
Eupl11g00866 428 FunFam transcription factor UNE10 isoform X1 222 287 - -
Eupl11g00866 428 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 227 276 IPR011598 GO:0046983
Eupl11g00866 428 Coils Coil 233 253 - -
Eupl11g00866 428 SMART finulus 233 282 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00866 Eupl-Chr11 11105262 11109183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00866 44 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 43.382 6.76e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl11g00866 HLH 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00866 - - vvi:100262138 526.168