Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00861 ATGGACCGAGAAATGCCTGCTCGTCGAGTTATCGCATTTGTGCTAATCATCCTTGTCATCTTCTCTTCAAGCGAGTTGGGATGGTTTAAGTTCGGAGAACCTCGTCTACTGGATGTAACTGTCGTGCCTCTTGGCAAGGACTGTTGCAGTCACAAGTATCCTCCAATGGTGGATGTAACTGTTGTGCCTCCTAGCAAGAACTGCAACTGTACTGACACGCACCAGCATTGTTGCTCAAACACTCTGTTTGAACCCATGAAGCCTAGATGCGGAGAAGTAAAGCTGAAAACCTGTAATCTTTTAAATACCCAGAAGCAGAAATCTTTGTTTCCGTCGTTAACTTGCTCTGTAATGGCGACTCAGAAACCTCAAAGGTCTCCGGCAGAGATAGAAGACATCATTCTTCGAAAAATTTTCTTGATCTCTCTAATCGATTCGATGGAAAATGATTCGCGAATCGTATATTTGGAGAGGACAGCGGCCGAAATTCTTAGCGAGGGGAAACCACTTATGCTTTCTCGAGATTTGATGGAGCGGGTTCTGATCGATCGCCTCTCGGATCAATTCCCGGCGCTGAACCAACTTTTCCTTACTTGA 597 0.4539 MDREMPARRVIAFVLIILVIFSSSELGWFKFGEPRLLDVTVVPLGKDCCSHKYPPMVDVTVVPPSKNCNCTDTHQHCCSNTLFEPMKPRCGEVKLKTCNLLNTQKQKSLFPSLTCSVMATQKPQRSPAEIEDIILRKIFLISLIDSMENDSRIVYLERTAAEILSEGKPLMLSRDLMERVLIDRLSDQFPALNQLFLT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00861 198 PANTHER UBIQUITINATION FACTOR E4 101 188 IPR045132 GO:0000151|GO:0030433|GO:0034450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00861 Eupl-Chr11 11052245 11057901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00861 118 189 U-box Gene Family AT5G15400 79.167 9.68e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00861 K10597 - aew:130753191 126.716