Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00843 ATGGAAGGAAACAATGGAGCTTCAAGAGCAACAGCTCCTCCTCGCCCTACGATTGCTCTCCCGCCTCGCTCCTCCGTCGAGAACCTCTTCATAGGTGGAGCTGGCTTGAGCCCCGGACCGATGACGCTCGTCTCGAATTTCTTCTCCGAGAACGATCCCGACTCCGAGTGTCGCTCGTTCTCGCAGCTTCTCGCCGGAGCGATGTCTTCGCCGGTAGCCGTCGCCGGTCGGAGACCGAATTCCTTGACGGAGGAGGATTCATCGAAGAAGAGAGATTCGGGAGATGGGGGTGAAAAGGATTTGCGGTGTAAGCAGAATCGCCCGTTGAATTTGGTGGTTTCGCAGTCGCCCATGTTTACGGTTCCTCTTGGGTTGAGCCCTGCTACCCTGCTCGACTCTCCCGGGTTTTTTTCATCTGGTCAGGGCCCCTTTGGAATCTCTCACCAACAGGCCCTGGCCCAAGTTACAGCTCAAGCTGCCCAATCCCAATCTCATATGCACATTCAAGCTGAATATCCGTCTTCTCTGTCAGCACCACCTTCAGCTTCATTGGTACTCCATCAATCCTTCACTTCCAATGCAACTCCGCCCCAGCAGGTGCCACCCTTACCATCCGACCATAAAAGCACAATGGTGGAATCAGCAGAGGTCTCTCATTCTGATCAGAAATCCCAACCCCTTATTGTCGATAAGCCTGCCGATGATGGCTACAACTGGCGGAAATATGGGCAGAAGCAGGTGAAAGGCAGCGAATATCCTCGAAGCTACTACAAATGTACCCATCCGAATTGTCCTGTCAGGAAAAAGGTTGAGCGTTCTCTTGATGGCCAAGTAACTGAGATTATCTATAAGGGCCAGCACAACCATCGACCACCTCAACCAAATAAGCGCACAAAGGAAGGTGGAAATCCAAATGGAAAAATGAGTTTGCCAGGGAATTCTGAAATGGGTTTGCAGGGTCACCCTGGGAATTTAAGCAGATCAAATGAAGTTGTAGCTGCTCCAATATCTAGGAGGGATCAGGAATCTAGCCAAGCAACACCTGAACAGTTATCTAGCTCAAGCGACGGAGAGGAAGTGGGTGATGCTGAAACAAGAGTAGATGAAGAGGATGAACCTGATTCAAAGCGAAGGAACACAGAGATCAGGGTATCTGAGCCAGCTTCTTCACACAGGACAGTCACAGAACCTAGGATCATTTTGCAGACAACGAGTGAAGTTGATCTTTTGGATGATGGCTATAGGTGGCGCAAGTATGGGCAGAAAGTGGTCAAAGGGAATCCTCATCCAAGGAGCTATTATAAATGCACAAATGCTGGATGTAATGTTCGTAAGCATGTTGAAAGGGCTTCAACAGACCCCAAAGCTGTCATTACGACATATGAGGGGAAACATAATCACGATGTGCCGGCAGCTAAAAACAGTAGCCACAACACGGCCCACAGTAATGCTACACAGCTAAAACCACAAAATTCTGTAGCGGAGAAGCATGCCTTGGTTAAAAATACTGATTTCGGGAACAATGATCGACAGCCTGTGACACTCGCGCAGTTAAAAGAAGAGCACATCACTTAG 1575 0.494 MEGNNGASRATAPPRPTIALPPRSSVENLFIGGAGLSPGPMTLVSNFFSENDPDSECRSFSQLLAGAMSSPVAVAGRRPNSLTEEDSSKKRDSGDGGEKDLRCKQNRPLNLVVSQSPMFTVPLGLSPATLLDSPGFFSSGQGPFGISHQQALAQVTAQAAQSQSHMHIQAEYPSSLSAPPSASLVLHQSFTSNATPPQQVPPLPSDHKSTMVESAEVSHSDQKSQPLIVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVRKKVERSLDGQVTEIIYKGQHNHRPPQPNKRTKEGGNPNGKMSLPGNSEMGLQGHPGNLSRSNEVVAAPISRRDQESSQATPEQLSSSSDGEEVGDAETRVDEEDEPDSKRRNTEIRVSEPASSHRTVTEPRIILQTTSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTNAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKNSSHNTAHSNATQLKPQNSVAEKHALVKNTDFGNNDRQPVTLAQLKEEHIT* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00843 524 FunFam WRKY transcription factor 220 293 - -
Eupl11g00843 524 SUPERFAMILY WRKY DNA-binding domain 402 470 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 131 490 IPR044810 GO:0003700
Eupl11g00843 524 MobiDBLite consensus disorder prediction 192 239 - -
Eupl11g00843 524 MobiDBLite consensus disorder prediction 282 397 - -
Eupl11g00843 524 FunFam WRKY transcription factor 33 397 463 - -
Eupl11g00843 524 MobiDBLite consensus disorder prediction 338 358 - -
Eupl11g00843 524 MobiDBLite consensus disorder prediction 370 385 - -
Eupl11g00843 524 SMART WRKY_cls 410 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 MobiDBLite consensus disorder prediction 71 102 - -
Eupl11g00843 524 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 Gene3D WRKY domain 395 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 Gene3D WRKY domain 219 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 SUPERFAMILY WRKY DNA-binding domain 231 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 MobiDBLite consensus disorder prediction 298 312 - -
Eupl11g00843 524 MobiDBLite consensus disorder prediction 1 23 - -
Eupl11g00843 524 ProSiteProfiles WRKY domain profile. 405 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 Pfam WRKY DNA -binding domain 411 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl11g00843 524 MobiDBLite consensus disorder prediction 472 492 - -
Eupl11g00843 524 MobiDBLite consensus disorder prediction 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00843 Eupl-Chr11 10857323 10865801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00843 10 524 WRKY Transcription Factor Family AT2G03340 59.515 2.56e-176 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl11g00843 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00843 - - nnu:104598039 754.207