Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00840 ATGGCGCTGTTCAGAAGGTTGTTCTATCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTACGTGTTCGACTGTTGCTTCTCCACAGACATTTTGGAAGAGGATGAATACAAGGTTTACATGGGTGGCATCGTGGCCCAGCTACAGGACCATTTTCCGGATGCCTCTTTCATGGTATTTAACTTTAGGGAGGGAGAAAGGAGGAGTCAGATTTCAGATATATTGTCTCAGTACGACATGACTGTTATGGACTACCCACGTCAATATGAGGGTTGTCCTCTGCTACCATTGGAGATGATCCACCACTTCTTGAGATCAAGTGAGAGTTGGTTGTCATTGGAAGGGCAACAGAATGTGTTACTGATGCACTGCGAGAGAGGAGGATGGCCTGTGCTCGCATTCATGCTTGCAGGTCTTTTGTTATACAGAAAACAGTACACTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGGGAACTCCTGCATCTTTTGTCTCCATTAAACCCACAACCTTCCCAGCTGAGATATCTCCAGTACATCTCCCGTAGAAATCTTGGTTCAGATTGGCCTCCATCAGATACACCTTTGACTTTGGATTCTCTTATCCTTAGAGTCCTTCCAATATTCAATGGAGAAAGGGGCTGCAGGCCAGTAGTTCGGGTTTACGGCCAGGATCCTTCAACTCCAGCCAACAGAAGTTCGAAAATTTTATTTTCAACCCCAAAGACGAAGAAACATGCTCGCCACTACAGACAGGCAGAGAGAGCATTAGTGCACATAGATATTCGATGTCGTGTTCAAGGAGACGTGGTTCTTGAATGCATCCATTGGGATCAAGATATGGTACGCGAGGAGATGATGTTCAGGGTTATGTTTAACACTGTTTTTATCCGGTCAAATATTTTGATGCTCAACCGTGATGAAATCGACGTTTTATGGGATGCCAAGGACCAGTTTCCGAAGGACTTCAAAGCAGAGGTACTGTTCTCGGATTCTGATGCTATTGGGTCTAATATCACCATGGAAGTGGTAAGTGGAGATGAGGATGAGACAGAAGGTGCTTCAACGGAGGAGTTCTTTGAGGTGGAGGAGATCTTCAGCAGTGCAGATGGGCAAGATGTAAAGGCAGATTCAGATATTCACAAAGTTCAAGACAGCACATTGGATGATGGAAATGGCATGCAGGATGGGAAAGGGGATTTTTTCCTTCAAAGAGTTCGAGACAGCACATTGGATGATGAAAATCACAAAGGGGATAGAAAGGGGGGTTCTGATCTACGCACAATGCAAGATAGCACATTGGATGATGGAAATCACATACAGGACGGTAAAGGGGATTCTGATCTTAACAGAGTTCGAGACAACACATTGGTTGATGGAAATCACAAACAGGATAGAAAGGGTTTTTTTGATACTCATACAGTTCAACACAGCACATTGAACGATGGAAATGACAAACAGGATGGGAAGGGTTTTTTTGGTCTTCCCGGAGCTCAAGGCATCACGTTGGATGATGGGAATCCCCAAGTAGAAGCCAAGGCAGTGACTGCTAATGTGCACTGCAACTTGGAATCAAGTGACGGTAAACAGAATACAGGATACATTGCTACGCAGAACAATTTAGAGGCCAAAGGTTCATGGCAGAAATTGGATACTGATGTTCGCAAGCAGAAACCAGAGAAATTACTACCTCCCTCATCAAAGAAAGAGCTGACTTCCAATGTTGAGCCAACCTCAGATCCAGTTGTACCAAAACAAAAGGTTAAAAAAGATGAATCTCAGGGAACTCCCATGAAATCAACAAAACAAAAGATTGTATCTCGTTGGATTCCTCCAAACAAGGGGTCTTACATTAATTCCATGCACCCATCATCTCACCCACCATCAAGATATAACAGTGCGCCTGCTGCTCTAGAGATTATTGCACTTTCACAAGATTGTGGTGCAGGTGAAACTCCAGAGGCTCTTCCAATATTTCCACCAACTGCAGAACTGACTAACATATCTCATGATGTCAATTCTGTCACACCTTCCGAATCTGTAGGGGGGGATGCACGTAGTCGCCCTCCACCATCATCATTACCTTCCCAGCAAGTAACATCTGCCGCCCACCCTCCACCTCCACTGCCACCCCCACCCCCACCTCCCCCCCTCCACCTCCACCTCCACCTCCACCTTTCTCAACTGCTTTCCGGACAATCCCTCTTCCCCCTCCACCTCCCCCGTTGGCCCTTCGCCCATTCACACTAG 2271 0.4624 MALFRRLFYRKPPDRLLEISERVYVFDCCFSTDILEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDILSQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLTLDSLILRVLPIFNGERGCRPVVRVYGQDPSTPANRSSKILFSTPKTKKHARHYRQAERALVHIDIRCRVQGDVVLECIHWDQDMVREEMMFRVMFNTVFIRSNILMLNRDEIDVLWDAKDQFPKDFKAEVLFSDSDAIGSNITMEVVSGDEDETEGASTEEFFEVEEIFSSADGQDVKADSDIHKVQDSTLDDGNGMQDGKGDFFLQRVRDSTLDDENHKGDRKGGSDLRTMQDSTLDDGNHIQDGKGDSDLNRVRDNTLVDGNHKQDRKGFFDTHTVQHSTLNDGNDKQDGKGFFGLPGAQGITLDDGNPQVEAKAVTANVHCNLESSDGKQNTGYIATQNNLEAKGSWQKLDTDVRKQKPEKLLPPSSKKELTSNVEPTSDPVVPKQKVKKDESQGTPMKSTKQKIVSRWIPPNKGSYINSMHPSSHPPSRYNSAPAALEIIALSQDCGAGETPEALPIFPPTAELTNISHDVNSVTPSESVGGDARSRPPPSSLPSQQVTSAAHPPPPLPPPPPPPPLHLHLHLHLSQLLSGQSLFPLHLPRWPFAHSH* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00840 756 Gene3D - 207 337 - -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 416 460 - -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 416 433 - -
Eupl11g00840 756 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 444 460 - -
Eupl11g00840 756 SMART PTEN_C2_2 198 338 IPR014020 -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 680 727 - -
Eupl11g00840 756 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Eupl11g00840 756 PANTHER FORMIN-J 1 724 - -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 555 572 - -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 590 604 - -
Eupl11g00840 756 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Eupl11g00840 756 CDD PTP_PTEN-like 16 190 - -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 708 727 - -
Eupl11g00840 756 Gene3D Protein tyrosine phosphatase superfamily 14 206 IPR029021 -
Eupl11g00840 756 MobiDBLite consensus disorder prediction 553 611 - -
Eupl11g00840 756 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00840 Eupl-Chr11 10813752 10817148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00840 1 725 FH2 protein (formin) Gene Family AT5G07740 56.011 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00840 - - ming:122076283 849.736