LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl11g00833	ATGGATGGATCAAGTGGCAAAGGAGGCACTGGTGTGGATATGATTTTACAAAATTATAAGCTTGGGAAGACTCTCGGCATCGGTTCATTTGGTAAGGTGAAAATTGCAGAGCATGCGCTGACAGGCCACAAAGTTGCTATCAAAATCCTTAACCGCCGTAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGACGAGAAATCAAAATATTGAGATTATTCATGCATCCTCATATTATACGACTTTATGAGGTTTTAGAGACACAGTTTGATATTTATGTTGTGATGGAGTATGTGAAGTCTGGGGAGCTATTTGATTACATTGTAGAGAAGGGTAGGTTACAGGAAGATGAAGCTCGCAATTTTTTTCAGCAGATCATTTCAGGAGTTGAGTATTGCCACAGAAACATGGTGGTTCATCGGGACCTAAAGCCGGAGAACCTGCTTTTGGATTCAAAATGGAATGTGAAGATTGCTGATTTTGGCTTGAGCAATATCATGCGGGATGGCCATTTTTTGAAGACAAGCTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTTATTTCTGGGAAACTATATGCTGGGCCTGAGGTAGATGTTTGGAGCTGTGGTGTTATCTTGTATGCCCTTCTATGTGGTACCCTTCCTTTTGATGATGAAAACATTCCCAACCTGTTCAAGAAAATAAAGGGTGGAATATATACTCTACCAAGCCATTTATCGCCTGGAGCAAGGGATTTGATCCCAAGGATGCTTGTTGTTGACCCTATGAAGCGAATGACCATTCCTGAGATCCGTCAGCACCCATGGTTTCAAGCTCATCTTCCTCGCTATCTAGCCGTGCCTCCACCAGATACAACGCAACAGGCGAAAAAGATTGATGAGGACATTCTTCAGGAAGTAATTAAGATGGGATTTGACCGGAACCAACTGGGTGAATCTCTTCGCAACAGAGTACAAAATGAGGCAACTGTTGCATATTATTTGCTACTGGACAACCGGTTCCGTGCTACCAGCGGATATCTTGGAGCTGATTTTCAGGAATCCATGGAGTGTGGTTTGACCCGTACGCATCCAGGAGAAGCTGTGACTTCAGCCATTGGGCACCATCTTCCGGGATATATGGATCATCAGGGAATCGGTTTAAGACCCCAGTTCCCTGTTGAGAGGAAATGGGCTCTTGGACTTCAGTCTCGAGCCCATCCTCGTGAGATAATGACGGAGGTTCTCAAAGCTCTGCAAGAACTGAATGTGGGCTGGAAAAAGATTGGACACTACAACATGAAGTGCAGGTGGTTTCCTGGCCATTCTGAAGGCATGGTAAACAACACTGTGCATGGTAACCATTACTTTGGGGATGAATATGCCATTGTTGAGAATGATGGTGTAGGCATCAGGTTACCGAATGTGGTCAAGTTTGAAGTGCAGCTGTACAAGACTCGCGAGGAGAAGTATCTGCTTGATCTACAGAGGGTCACTGGCCCACAGTTTCTCTTCCTCGATCTCTGTGCCGCTTTCCTTGCTCAGCTTCGGGTCCTCTAA	1542	0.4488	MDGSSGKGGTGVDMILQNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVLETQFDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTTQQAKKIDEDILQEVIKMGFDRNQLGESLRNRVQNEATVAYYLLLDNRFRATSGYLGADFQESMECGLTRTHPGEAVTSAIGHHLPGYMDHQGIGLRPQFPVERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCRWFPGHSEGMVNNTVHGNHYFGDEYAIVENDGVGIRLPNVVKFEVQLYKTREEKYLLDLQRVTGPQFLFLDLCAAFLAQLRVL*	514

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Eupl11g00833	513	ProSitePatterns	Protein kinases ATP-binding region signature.	25	48	IPR017441	GO:0005524
Eupl11g00833	513	Gene3D	Transferase(Phosphotransferase) domain 1	10	348	-	-
Eupl11g00833	513	CDD	STKc_AMPK_alpha	18	271	-	-
Eupl11g00833	513	FunFam	Non-specific serine/threonine protein kinase	8	100	-	-
Eupl11g00833	513	ProSiteProfiles	Kinase associated domain 1 (KA1) profile.	464	512	IPR001772	-
Eupl11g00833	513	Pfam	UBA/TS-N domain	293	329	IPR015940	-
Eupl11g00833	513	FunFam	Non-specific serine/threonine protein kinase	395	511	-	-
Eupl11g00833	513	ProSiteProfiles	Ubiquitin-associated domain (UBA) profile.	292	332	IPR015940	-
Eupl11g00833	513	SUPERFAMILY	Protein kinase-like (PK-like)	15	286	IPR011009	-
Eupl11g00833	513	CDD	UBA_SnRK1_plant	293	333	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl11g00833	Eupl-Chr11	10730535	10739605	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl11g00833	19	271	CBL-interacting serine-threonine protein kinases	AT4G24400	52.756	1.59e-93	289

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_AMPK	Eupl11g00833		Pkinase	3.4e-80	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl11g00833	K07198		-	nnu:104599671	940.643

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